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SCNpilot_bf_inoc_scaffold_1083_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1083_curated_1
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..2399)
DNA (2397bp) protein (799aa)
Putative TonB-dependent receptor exported protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6JFE5_9PORP
Putative TonB-dependent receptor exported protein {ECO:0000313|EMBL:CDB48902.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
TonB-dependent receptor
SCNpilot_bf_inoc_scaffold_1083_curated_2
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2665..3303
DNA (639bp) protein (213aa)
SagB-type dehydrogenase domain-containing protein n=3 Tax=Parabacteroides RepID=K5ZGR5_9PORP
SagB-type dehydrogenase domain-containing protein {ECO:0000313|EMBL:KKB52275.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1083_curated_3
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3489..3893)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5MC25_9BACT
Amidohydrolase {ECO:0000313|EMBL:AHF11506.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
Antibiotic biosynthesis monooxygenase
SCNpilot_bf_inoc_scaffold_1083_curated_4
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

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comp(3995..4396)
DNA (402bp) protein (134aa)
Uncharacterized protein id=3492738 bin=GWC1_Spirochaetes_27_15 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
Tax=GWD1_Spirochaetes_27_9_curated
SCNpilot_bf_inoc_scaffold_1083_curated_5
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4528..5226)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PA24_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ06721.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1083_curated_6
Cellulophaga geojensis, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5301..7718)
DNA (2418bp) protein (806aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000364F546
TonB-dependent outer membrane receptor {ECO:0000313|EMBL:EWH14689.1}; TaxID=1328323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga geojensis KL-A.;"
tonb-dependent receptor plug
SCNpilot_bf_inoc_scaffold_1083_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7911..9203)
DNA (1293bp) protein (431aa)
twp-component sensor histidine kinase n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559877
Uncharacterized protein {ECO:0000313|EMBL:KIC90283.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
integral membrane sensor signal transduction histidine kinase
SCNpilot_bf_inoc_scaffold_1083_curated_8
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(9213..9887)
DNA (675bp) protein (225aa)
transcriptional regulator n=1 Tax=Flavobacteriaceae bacterium S85 RepID=UPI0002559878
Transcriptional regulator {ECO:0000313|EMBL:AIM37533.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
winged helix family two component transcriptional regulator
SCNpilot_bf_inoc_scaffold_1083_curated_9
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9915..11198)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AXJ0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB51235.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
heat shock protein
SCNpilot_bf_inoc_scaffold_1083_curated_10
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11378..12562)
DNA (1185bp) protein (395aa)
MFS transporter n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B50DB1
Arabinose efflux permease
Arabinose efflux permease {ECO:0000313|EMBL:CBK74121.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
SCNpilot_bf_inoc_scaffold_1083_curated_11
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12575..12940)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Prevotella paludivivens RepID=UPI00036E1647
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
SCNpilot_bf_inoc_scaffold_1083_curated_12
Bacteroides thetaiotaomicron CAG:40, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12943..13320)
DNA (378bp) protein (126aa)
Putative fluoride ion transporter CrcB n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KM95_9BACE
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1263054 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides thetaiotaomicron CAG:40.;"
hypothetical protein; K06199 CrcB protein
SCNpilot_bf_inoc_scaffold_1083_curated_13
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13754..14197
DNA (444bp) protein (148aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X9E2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50869.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
SCNpilot_bf_inoc_scaffold_1083_curated_14
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14300..15679)
DNA (1380bp) protein (460aa)
DNA primase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YUH8_9PORP
DNA primase {ECO:0000313|EMBL:KKB54002.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
DNA primase
SCNpilot_bf_inoc_scaffold_1083_curated_15
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15676..16425)
DNA (750bp) protein (250aa)
replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5Z9H2_9PORP
Replicative DNA helicase {ECO:0000313|EMBL:KKB49554.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
SCNpilot_bf_inoc_scaffold_1083_curated_16
unknown

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16720..17079
DNA (360bp) protein (120aa)

This feature has no annotations

Displaying 16 items

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