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SCNpilot_bf_inoc_scaffold_219_curated

Search features with annotation key words

Displaying items 121-150 of 262 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_219_curated_121
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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154577..155023
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E3613
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_122
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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155028..156350
DNA (1323bp) protein (441aa)
preprotein translocase subunit SecY n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000367F17C
secY; preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_123
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

156375..157154
DNA (780bp) protein (260aa)
map; methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
methionine aminopeptidase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379DA06
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_124
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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157171..157389
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 id=3592542 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_125
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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157590..157706
DNA (117bp) protein (39aa)
50S ribosomal protein L36 id=3592539 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
50S ribosomal protein L36
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_126
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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157730..158110
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AA6C2
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_bf_inoc_scaffold_219_curated_127
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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158124..158513
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003813001
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
SCNpilot_bf_inoc_scaffold_219_curated_128
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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158640..159248
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D5288
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_129
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

159253..160254
DNA (1002bp) protein (334aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
DNA-directed RNA polymerase subunit alpha n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E4F12
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_130
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


160263..160886
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369528D
50S ribosomal protein L17
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_219_curated_131
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

161171..162409
DNA (1239bp) protein (413aa)
NADH dehydrogenase {ECO:0000313|EMBL:CEA15478.1}; EC=1.6.99.3 {ECO:0000313|EMBL:CEA15478.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ndh; NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036564F4
SCNpilot_bf_inoc_scaffold_219_curated_132
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(162415..163092)
DNA (678bp) protein (226aa)
Two-component system response regulator n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PIU9_9PORP
Two-component system response regulator {ECO:0000313|EMBL:CCZ09866.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
two-component system response regulator
SCNpilot_bf_inoc_scaffold_219_curated_133
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163104..164489)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A194A
two-component system sensor histidine kinase
SCNpilot_bf_inoc_scaffold_219_curated_134
unknown

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164689..164862
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_219_curated_135
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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164925..166475
DNA (1551bp) protein (517aa)
Uncharacterized protein n=2 Tax=Bacteroides cellulosilyticus RepID=I9PL83_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY17043.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_219_curated_136
unknown

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166548..166721
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_219_curated_137
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

166812..167942
DNA (1131bp) protein (377aa)
Peroxiredoxin n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T1I2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ETZ24124.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
thiol-disulfide isomerase-like thioredoxin
SCNpilot_bf_inoc_scaffold_219_curated_138
unknown

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168018..168197
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_219_curated_139
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168190..168633
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038245B7
Uncharacterized protein {ECO:0000313|EMBL:CCZ09240.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
SCNpilot_bf_inoc_scaffold_219_curated_140
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168659..168967
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00038245B7
Uncharacterized protein {ECO:0000313|EMBL:CCZ09240.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
SCNpilot_bf_inoc_scaffold_219_curated_141
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

168993..171203
DNA (2211bp) protein (737aa)
ABC transporter, ATP-binding protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2CCV0_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERI88319.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_bf_inoc_scaffold_219_curated_142
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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171227..172585
DNA (1359bp) protein (453aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UHM7_TANFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW20437.1}; TaxID=203275 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
SCNpilot_bf_inoc_scaffold_219_curated_143
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

172664..173500
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z176_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK60351.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_219_curated_144
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

173538..174545
DNA (1008bp) protein (336aa)
Glycosyl transferase family 2 n=5 Tax=Bacteroides RepID=E5VEM7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY73089.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_219_curated_145
unknown

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174493..174609
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_219_curated_146
unknown

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174615..175472
DNA (858bp) protein (286aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_219_curated_147
unknown

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175800..175982
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_219_curated_148
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

176059..176916
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K3E8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETK11286.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 8/11.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_219_curated_149
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

176920..177762
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5TYG8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETK11285.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 8/11.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_219_curated_150
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

177803..180514
DNA (2712bp) protein (904aa)
TonB-dependent receptor n=1 Tax=Prevotella disiens JCM 6334 = ATCC 29426 RepID=U2ISX5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETK12711.1}; TaxID=1411915 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 8/11.;"
hypothetical protein
Displaying items 121-150 of 262 in total

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