ggKbase home page

SCNpilot_bf_inoc_scaffold_454_curated

Search features with annotation key words

Displaying items 31-60 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_454_curated_31
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27911..28291
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003689BE5
NrdI protein; K03647 protein involved in ribonucleotide reduction
NrdI protein {ECO:0000313|EMBL:ADZ79459.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_bf_inoc_scaffold_454_curated_32
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

28358..30448
DNA (2091bp) protein (697aa)
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003797396
SCNpilot_bf_inoc_scaffold_454_curated_33
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

30725..31720
DNA (996bp) protein (332aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 / NCTC 11300).;"
ribonucleotide-diphosphate reductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370BD39
SCNpilot_bf_inoc_scaffold_454_curated_34
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31722..33542)
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036B4B7B
Uncharacterized protein {ECO:0000313|EMBL:AHM60969.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
SCNpilot_bf_inoc_scaffold_454_curated_35
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33557..34222)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3CHY3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV05639.1}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
SCNpilot_bf_inoc_scaffold_454_curated_36
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

34883..37174
DNA (2292bp) protein (764aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chry
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=2 Tax=Elizabethkingia anophelis RepID=H0KXY0_9FLAO
Methionine synthase II (cobalamin-independent)
SCNpilot_bf_inoc_scaffold_454_curated_37
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37202..38878
DNA (1677bp) protein (559aa)
Uncharacterized transporter BT_2092 n=2 Tax=Bacteroides RepID=Y2092_BACTN rbh
Transporter {ECO:0000313|EMBL:KGN83147.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
hypothetical protein; K07085 putative transport protein rbh
SCNpilot_bf_inoc_scaffold_454_curated_38
unknown

Not on your lists

38912..39049
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_454_curated_39
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39102..40610
DNA (1509bp) protein (503aa)
pyruvate carboxylase subunit A; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372CAF1
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_40
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40607..41110
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003709E3A
methylmalonyl-CoA decarboxylase biotin carboxyl carrier subunit
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_41
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41121..42653
DNA (1533bp) protein (511aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
methylmalonyl-CoA carboxyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C38FA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_42
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43089..45128
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000368065E
Uncharacterized protein {ECO:0000313|EMBL:EGJ99224.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Outer membrane cobalamin receptor protein
SCNpilot_bf_inoc_scaffold_454_curated_43
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45125..46360
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F957A
Uncharacterized protein {ECO:0000313|EMBL:EGJ99225.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_454_curated_44
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

46393..48078
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003626F0F
Uncharacterized protein {ECO:0000313|EMBL:EGJ99226.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
PKD domain containing protein
SCNpilot_bf_inoc_scaffold_454_curated_45
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

48098..50218
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000372BC02
Uncharacterized protein {ECO:0000313|EMBL:EGJ99227.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_454_curated_46
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

50233..52251
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373719A
Uncharacterized protein {ECO:0000313|EMBL:EGJ99228.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
epidermal growth-factor receptor (EGFR) L domain
SCNpilot_bf_inoc_scaffold_454_curated_47
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

52994..55105
DNA (2112bp) protein (704aa)
ribonucleoside triphosphate reductase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000364CF04
anaerobic ribonucleoside-triphosphate reductase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_48
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

55151..55588
DNA (438bp) protein (146aa)
radical enzyme activating protein; K04068 anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036640E3
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_49
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(55697..57484)
DNA (1788bp) protein (596aa)
GTP-binding protein LepA n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003817E13
GTP-binding protein LepA; K03596 GTP-binding protein LepA
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_50
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57665..59062)
DNA (1398bp) protein (466aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
asparaginyL-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
asparaginyl-tRNA synthetase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000371CC8E
SCNpilot_bf_inoc_scaffold_454_curated_51
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(59249..60532)
DNA (1284bp) protein (428aa)
ribosomal large subunit pseudouridine synthase B; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AC33F
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_52
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60754..62091)
DNA (1338bp) protein (446aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369EE1E
SCNpilot_bf_inoc_scaffold_454_curated_53
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

62695..63024
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IX83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02430.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
integrase
SCNpilot_bf_inoc_scaffold_454_curated_54
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

63024..63908
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IX83_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02430.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
transposase
SCNpilot_bf_inoc_scaffold_454_curated_55
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64189..65067
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITU6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99189.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
NAD-dependent epimerase/dehydratase
SCNpilot_bf_inoc_scaffold_454_curated_56
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

65120..65605
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99190.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
glyoxalase/Bleomycin resistance protein
SCNpilot_bf_inoc_scaffold_454_curated_57
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

65651..66415
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CHN1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL71819.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
3-oxoacyl-ACP reductase
SCNpilot_bf_inoc_scaffold_454_curated_58
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

66433..67353
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ITU8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99191.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
AraC family transcriptional regulator
SCNpilot_bf_inoc_scaffold_454_curated_59
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67631..67861
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6ZBN5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY16045.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
SCNpilot_bf_inoc_scaffold_454_curated_60
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

67854..68270
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X504_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU52974.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
Displaying items 31-60 of 72 in total

View Taxonomy