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SCNpilot_bf_inoc_scaffold_454_curated

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_454_curated_1
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..1052
DNA (1050bp) protein (350aa)
peptide chain release factor 1 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DB536
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 rbh
SCNpilot_bf_inoc_scaffold_454_curated_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1134..1838
DNA (705bp) protein (235aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
orotidine 5''''-phosphate decarboxylase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036E2490
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_3
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1928..2515)
DNA (588bp) protein (196aa)
phosphatidylglycerophosphate synthase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002DDAA56
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:GAF04476.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
phosphatidylglycerophosphate synthase
SCNpilot_bf_inoc_scaffold_454_curated_4
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2599..3711)
DNA (1113bp) protein (371aa)
Male Sterility Domain-Containing Protein n=1 Tax=Bacteroidales bacterium CF RepID=U5QC08_9BACT
hypothetical protein
Male Sterility Domain-Containing Protein {ECO:0000313|EMBL:AGY54884.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_454_curated_5
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3740..4414)
DNA (675bp) protein (225aa)
Phosphatidate Cytidylyltransferase n=1 Tax=Bacteroidales bacterium CF RepID=U5QBQ9_9BACT
hypothetical protein
Phosphatidate Cytidylyltransferase {ECO:0000313|EMBL:AGY54885.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_454_curated_6
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4425..5153)
DNA (729bp) protein (243aa)
phosphatidate cytidylyltransferase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BEFA
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:AHW61222.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_454_curated_7
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5166..5954)
DNA (789bp) protein (263aa)
Permease n=1 Tax=Bacteroidales bacterium CF RepID=U5QBR2_9BACT
hypothetical protein
Permease {ECO:0000313|EMBL:AGY54890.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_454_curated_8
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6304..7527
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D9C6A
Uncharacterized protein {ECO:0000313|EMBL:CEA15764.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
phosphohydrolase; K06885
SCNpilot_bf_inoc_scaffold_454_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7524..8036)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000376E58D
hypothetical protein; K09790 hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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8449..8865
DNA (417bp) protein (139aa)
protein-tyrosine-phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003786A25
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_11
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8917..9324)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003793C90
Uncharacterized protein {ECO:0000313|EMBL:CEA15761.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_454_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9443..10378)
DNA (936bp) protein (312aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase id=1823028 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10642..11925)
DNA (1284bp) protein (428aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
eno; phosphopyruvate hydratase; K01689 enolase [EC:4.2.1.11] rbh
Enolase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X0M1_9PORP
SCNpilot_bf_inoc_scaffold_454_curated_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12637..13581
DNA (945bp) protein (315aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LH48_PARD8
hypothetical protein
Acetyltransferase family protein {ECO:0000313|EMBL:KDS71646.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
SCNpilot_bf_inoc_scaffold_454_curated_15
unknown

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comp(13875..14006)
DNA (132bp) protein (44aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_454_curated_16
unknown

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comp(14018..15157)
DNA (1140bp) protein (380aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_454_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15303..17000)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C3CE8
glycoside hydrolase family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16997..17911)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373C7F0
hypothetical protein; K07001 NTE family protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18060..18461)
DNA (402bp) protein (134aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382BE0A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18516..19568)
DNA (1053bp) protein (351aa)
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine tRNA ribosyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D74E9
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19598..19849)
DNA (252bp) protein (84aa)
tRNA pseudouridine synthase B (EC:4.2.1.70); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037ABF4A
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20317..21201)
DNA (885bp) protein (295aa)
UDP-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F50BE
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_23
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21235..21483)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037F251B
Uncharacterized protein {ECO:0000313|EMBL:CEA15753.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_454_curated_24
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21499..22377)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A3135
cell division protein FtsX; K09811 cell division transport system permease protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_25
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22482..23519)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035D7A0F
integral membrane protein terc; K05794 tellurite resistance protein TerC
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_454_curated_26
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23604..25061)
DNA (1458bp) protein (486aa)
tRNA nucleotidyltransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003790798
Uncharacterized protein {ECO:0000313|EMBL:CEA15750.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
tRNA nucleotidyltransferase/poly(A) polymerase family protein
SCNpilot_bf_inoc_scaffold_454_curated_27
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25243..26061
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D77DB
Uncharacterized protein {ECO:0000313|EMBL:CEA15749.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
lipoprotein
SCNpilot_bf_inoc_scaffold_454_curated_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26284..26868
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZUM0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN07128.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
SCNpilot_bf_inoc_scaffold_454_curated_29
unknown

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26892..27095
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003682370
SCNpilot_bf_inoc_scaffold_454_curated_30
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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27675..27914
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377023A
Uncharacterized protein {ECO:0000313|EMBL:ERK68388.1}; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
hypothetical protein
Displaying items 1-30 of 72 in total

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