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SCNpilot_bf_inoc_scaffold_4731_curated

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_4731_curated_1
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(124..894)
DNA (771bp) protein (257aa)
UPF0246 protein BSIG_2801 n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IM30_9BACE
UPF0246 protein BSIG_2801 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
hypothetical protein; K09861 hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_4731_curated_2
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(898..1281)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHX1_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:AKD56421.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_4731_curated_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1474..3540
DNA (2067bp) protein (689aa)
transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase, thiamine diphosphate binding domain protein n=2 Tax=Parabacteroides RepID=B7B821_9PORP
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEC97417.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
SCNpilot_bf_inoc_scaffold_4731_curated_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3537..3971
DNA (435bp) protein (145aa)
ribose 5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose-5-phosphate isomerase B n=2 Tax=Parabacteroides merdae RepID=A7AFX1_9PORP
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EDN86027.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
SCNpilot_bf_inoc_scaffold_4731_curated_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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4188..4451
DNA (264bp) protein (88aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;"
pseudouridine synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Pseudouridine synthase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2DE40_9FIRM
Displaying 5 items

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