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SCNpilot_bf_inoc_scaffold_1184_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1184_curated_1
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(245..934)
DNA (690bp) protein (230aa)
Conserved hypothetical periplasmic protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LA24_ZOBGA
periplasmic protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_bf_inoc_scaffold_1184_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(997..1572)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035CDD80
Putative membrane protein {ECO:0000313|EMBL:CEA15249.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1184_curated_3
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1781..5809
DNA (4029bp) protein (1343aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AVW3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS17078.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
histidine kinase
SCNpilot_bf_inoc_scaffold_1184_curated_4
unknown

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6768..7139
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1184_curated_5
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7124..9061)
DNA (1938bp) protein (646aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YM06_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB52280.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
hypothetical protein rbh
SCNpilot_bf_inoc_scaffold_1184_curated_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9208..10935)
DNA (1728bp) protein (576aa)
Uncharacterized protein id=1810472 bin=GWE2_Bacteroidetes_42_39 species=Parabacteroides johnsonii genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
RagB/SusD domain protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_1184_curated_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10948..14139)
DNA (3192bp) protein (1064aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6Q1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14087.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_1184_curated_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14376..16415)
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YM15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB59049.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
Beta-galactosidase/beta-glucuronidase
SCNpilot_bf_inoc_scaffold_1184_curated_9
Bacteroides faecis CAG:32, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16531..17259)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Bacteroides faecis CAG:32 RepID=R6VET5_9BACE
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDC90556.1}; TaxID=1263044 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides faecis CAG:32.;"
SCNpilot_bf_inoc_scaffold_1184_curated_10
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17256..17753)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6ZRT2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD33162.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1184_curated_11
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17750..18520)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00035CBFA8
Uncharacterized protein {ECO:0000313|EMBL:CDD33163.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1184_curated_12
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18677..20032)
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06339.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1184_curated_13
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20044..21192)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RKG9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA55693.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
muconate cycloisomerase rbh
SCNpilot_bf_inoc_scaffold_1184_curated_14
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21200..22396)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DQA8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD91512.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:315.;"
putative peptidase
SCNpilot_bf_inoc_scaffold_1184_curated_15
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23187..26498)
DNA (3312bp) protein (1104aa)
Putative glycosyl hydrolase n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P308_9PORP
Putative glycosyl hydrolase {ECO:0000313|EMBL:CCZ08694.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
glycosyl hydrolase
Displaying 15 items

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