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SCNpilot_bf_inoc_scaffold_124_curated

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Displaying items 1-30 of 300 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_124_curated_1
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(47..646)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003702EC2
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EOR95235.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
RNA polymerase sigma-70 factor
SCNpilot_bf_inoc_scaffold_124_curated_2
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(941..1960)
DNA (1020bp) protein (340aa)
Branched-chain-amino-acid aminotransferase {ECO:0000313|EMBL:CEA17024.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CEA17024.1};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] rbh
branched-chain amino acid aminotransferase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036A06D5
SCNpilot_bf_inoc_scaffold_124_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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2073..4100
DNA (2028bp) protein (676aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003668934
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_4
unknown

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comp(4040..4192)
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_124_curated_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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4220..5119
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003785554
ABC transporter ATP-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_6
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5128..6441
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F8FE8
Uncharacterized protein {ECO:0000313|EMBL:CEA17027.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
ABC transporter permease; K01992 ABC-2 type transport system permease protein
SCNpilot_bf_inoc_scaffold_124_curated_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6741..7580
DNA (840bp) protein (280aa)
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036909EF
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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7718..8926
DNA (1209bp) protein (403aa)
diaminopimelate aminotransferase (EC:2.6.1.83)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D799F
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_9
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8932..10041)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000369913A
Uncharacterized protein {ECO:0000313|EMBL:EEO56394.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_124_curated_10
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10063..11565)
DNA (1503bp) protein (501aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003746DBF
Uncharacterized protein {ECO:0000313|EMBL:EFS33089.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_124_curated_11
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11577..14669)
DNA (3093bp) protein (1031aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D9685
TonB-dependent Receptor Plug domain-containing protein {ECO:0000313|EMBL:EFV31610.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_124_curated_12
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14704..17451)
DNA (2748bp) protein (916aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003668F53
Uncharacterized protein {ECO:0000313|EMBL:KFC59035.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
alpha-1,2-mannosidase
SCNpilot_bf_inoc_scaffold_124_curated_13
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17465..18322)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037B772A
Uncharacterized protein {ECO:0000313|EMBL:EFS33091.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
SCNpilot_bf_inoc_scaffold_124_curated_14
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18435..19526)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003665751
Uncharacterized protein {ECO:0000313|EMBL:CEA15314.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Transcriptional regulator/sugar kinase
SCNpilot_bf_inoc_scaffold_124_curated_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19516..20679)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037146E7
Glucose/galactose transporter {ECO:0000313|EMBL:CEA15313.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
glucose/galactose transporter
SCNpilot_bf_inoc_scaffold_124_curated_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20691..22430)
DNA (1740bp) protein (580aa)
Phosphomannose isomerase (EC:5.3.1.8)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AEDCC
Uncharacterized protein {ECO:0000313|EMBL:CEA15312.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_124_curated_17
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22549..23271
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003791F98
Uncharacterized protein {ECO:0000313|EMBL:CEA15311.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transcriptional regulator, GntR family
SCNpilot_bf_inoc_scaffold_124_curated_18
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23510..24451
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000360744E
Putative ABC transporter permease protein YclN {ECO:0000313|EMBL:CEA17030.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transporter permease; K02015 iron complex transport system permease protein
SCNpilot_bf_inoc_scaffold_124_curated_19
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24448..25398
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003661AB0
Putative ABC transporter permease protein YclO {ECO:0000313|EMBL:CEA17031.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
transporter permease; K02015 iron complex transport system permease protein
SCNpilot_bf_inoc_scaffold_124_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25395..26153
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037AB015
iron chelate ABC transporter ATP-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_21
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26274..27206
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000370C71F
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_22
Myroides odoratus, Myroides, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27217..27633
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036AB81D
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ41152.1}; Flags: Precursor;; TaxID=929704 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides.;" source="Myroides odoratus DSM 2801.;"
hypothetical protein; K08978 putative membrane protein
SCNpilot_bf_inoc_scaffold_124_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28812..29753
DNA (942bp) protein (314aa)
alpha-L-fucosidase; K01206 alpha-L-fucosidase [EC:3.2.1.51]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362264D
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_24
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29900..30256
DNA (357bp) protein (119aa)
ArsC family protein; K00537 arsenate reductase [EC:1.20.4.1]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037C68A2
Uncharacterized protein {ECO:0000313|EMBL:CEA17035.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
SCNpilot_bf_inoc_scaffold_124_curated_25
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30324..31310
DNA (987bp) protein (329aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035EDBF6
TIM-barrel enzyme
SCNpilot_bf_inoc_scaffold_124_curated_26
Flavobacterium psychrophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31494..31751
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Flavobacterium psychrophilum RepID=Q83XW2_FLAPS
Uncharacterized protein {ECO:0000313|EMBL:AAP32307.1}; TaxID=96345 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium psychrophilum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_124_curated_27
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31748..32023
DNA (276bp) protein (92aa)
Txe/YoeB family addiction module toxin n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z9U4_9PORP
Txe/YoeB family addiction module toxin {ECO:0000313|EMBL:EKN08156.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Txe/YoeB family addiction module toxin
SCNpilot_bf_inoc_scaffold_124_curated_28
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32095..32457
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036824A7
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32522..34267)
DNA (1746bp) protein (582aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037D3A45
peptidase, S41 family
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_124_curated_30
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34448..35149)
DNA (702bp) protein (234aa)
translation factor Sua5 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035C5F11
hypothetical protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=GWC2_Bacteroidetes_46_850_curated
Displaying items 1-30 of 300 in total

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