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SCNpilot_bf_inoc_scaffold_476_curated_48

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 57745..58233

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2B0F4_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 162.0
  • Bit_score: 220
  • Evalue 1.30e-54
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB56425.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 162.0
  • Bit_score: 220
  • Evalue 1.80e-54
RNA polymerase ECF-type sigma factor,sigma70 superfamily similarity KEGG
DB: KEGG
  • Identity: 33.5
  • Coverage: 155.0
  • Bit_score: 102
  • Evalue 1.20e-19

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 489
ATGATAAGCAAAGCAGAGTTCAAACAATTATTCGATAAGTATTTTGATACGATTCGAAGTTTTATCTTCTATCGCTGTGGCGATAGGGATGCAGCATCGGATATGGCACAGGATGTCTTTATGAAGATTTGGGAGAAACGGGAACAACTGGATAACCTTAATTTAAAACCATTGCTTTATAAGATAGCAAACGATATGGTTATAAGCAATTATCGAAAAAGTTCTACCCGTTTAGATTATGAGGTGAGTATGAGTATTCAGATTGATAGTCCCTTGTCGCCCGAAGATGAATTAAACTTTGAAGAATTGGCATCTACTTATGCTAAAGCATTAGAAAAGATGCCGGAATTACAAAGGGTTGTTTTCCTGATGAGCCGGAATGATGAACTAAAGTATAGTGAAATAGCCCAATGTTTGGATATAAGCGTAAAAGCTGTCGAAAAACGGATGAGCGCTGCTTTGCAATTTCTTAGGACAGAACTATTATAA
PROTEIN sequence
Length: 163
MISKAEFKQLFDKYFDTIRSFIFYRCGDRDAASDMAQDVFMKIWEKREQLDNLNLKPLLYKIANDMVISNYRKSSTRLDYEVSMSIQIDSPLSPEDELNFEELASTYAKALEKMPELQRVVFLMSRNDELKYSEIAQCLDISVKAVEKRMSAALQFLRTELL*