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SCNpilot_bf_inoc_scaffold_255_curated_203

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(222477..222833)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix motif {ECO:0000313|EMBL:GAO31619.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 118.0
  • Bit_score: 203
  • Evalue 1.60e-49
transcriptional regulator, xre family protein id=3700774 bin=GWF2_Bacteroidetes_49_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 119.0
  • Bit_score: 185
  • Evalue 3.30e-44
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 118.0
  • Bit_score: 162
  • Evalue 9.40e-38

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Taxonomy

Geofilum rubicundum → Geofilum → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 357
ATGAATATTAAAGTGATTAAAACAGAAGATGATTACCGGCAAGCATTAGAAAGACTTGAGGTGATTTTTGACACTCCGATTAATTCTCCCGAAGGAGATGAAGCAGAGATCCTAAGTATTTTGATAGAAAAATATGAAGATGAACATTATCCGATTGGACTACCTGACCCGATTGAGGCGATTAAGTTTCGGATGGAGCAAATGGATATGTCGAAAAGTGATTTAGCTGAGATAATTGGATATAAAAGCAGAGTTTCTGAGATTCTTAGTAGAAAACGTAAATTGACTTTACAAATGATACGTAAACTGCATGATGAGCTAAAAATACCATACGATACTTTGATCGCAGATTATTAA
PROTEIN sequence
Length: 119
MNIKVIKTEDDYRQALERLEVIFDTPINSPEGDEAEILSILIEKYEDEHYPIGLPDPIEAIKFRMEQMDMSKSDLAEIIGYKSRVSEILSRKRKLTLQMIRKLHDELKIPYDTLIADY*