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SCNpilot_bf_inoc_scaffold_309_curated_28

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 37455..38081

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=3 Tax=Parabacteroides RepID=K5YTL2_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 197.0
  • Bit_score: 158
  • Evalue 5.80e-36
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB53423.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 197.0
  • Bit_score: 158
  • Evalue 8.20e-36
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 190.0
  • Bit_score: 135
  • Evalue 1.70e-29

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 627
TTGCAGGCGATAACTCATAAGATGTTGAAAGTAATGAGACAGATTGAGGACGAGCAGCTTTTGGGGATGATGGAAAAAGGTTCGGAAAGAGCATTTGAAGAACTATATATCCGTTATAAGAAGAAACTGCATTCCTTTTGTTGTTTTCTTTTAAAGTCGGCTAATGTGGCGGACGATGTAGTCCAGGACGTTTTTGTGACTATCTGGCACAACCGGGAGAAAATAAACACGCACCAGTCATTCTCTTCTTATCTTTACACGATTACACGCAATAAAGCATTGAACGAGTTACGCAGTGAGCGTTCGACGGAGCGGCTTGATGAGATTGCGGAAGGGCGGCATGTCCTTTTTTCAGATGATAATACCGAAGCCGCGATTATCCTGAAAGAGTATGAAATTCTATTGCAGCAGGCAATTGACCTGTTACCTGAAGAGAGACGGCGTATTTACCGCATGAGCCGCGAAGAAGGATTTACCTATAAAGATATCGGCGAGTGTTTGGGAATCTCGCATCATACCGTACAGGCGCATATTTCAAGTTCAGTGCAGTTTATCCGGAGTTATTTCTTGCAGCATGCAAATGTTTTCCTCATAACATTTTCATCAATCCTTTTATATAATTTGTAA
PROTEIN sequence
Length: 209
LQAITHKMLKVMRQIEDEQLLGMMEKGSERAFEELYIRYKKKLHSFCCFLLKSANVADDVVQDVFVTIWHNREKINTHQSFSSYLYTITRNKALNELRSERSTERLDEIAEGRHVLFSDDNTEAAIILKEYEILLQQAIDLLPEERRRIYRMSREEGFTYKDIGECLGISHHTVQAHISSSVQFIRSYFLQHANVFLITFSSILLYNL*