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SCNpilot_bf_inoc_scaffold_309_curated

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Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_309_curated_1
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037A3527
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_2
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(413..4114)
DNA (3702bp) protein (1234aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
phosphoribosylformylglycinamidine synthase n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036BD764
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4245..4865
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036DF58D
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4849..5337)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C8104
phosphodiesterase, MJ0936 family; K07095
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_5
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5401..7482
DNA (2082bp) protein (694aa)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362BECC
SCNpilot_bf_inoc_scaffold_309_curated_6
Bacteroides sp. CAG:598, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7566..8348
DNA (783bp) protein (261aa)
Glycosyltransferase n=1 Tax=Bacteroides sp. CAG:598 RepID=R5C4B0_9BACE
Glycosyltransferase {ECO:0000313|EMBL:CCX62645.1}; TaxID=1262743 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:598.;"
glycosyltransferase
SCNpilot_bf_inoc_scaffold_309_curated_7
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8365..9357)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78) RepID=F0R4Z7_BACSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY36744.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strain DSM 18170 / JCM 13567 / BL78).;"
SCNpilot_bf_inoc_scaffold_309_curated_8
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9431..13714)
DNA (4284bp) protein (1428aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003758812
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_9
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13843..17655)
DNA (3813bp) protein (1271aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C1743
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_10
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(17752..18126)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 id=1903676 bin=GWD2_Bacteroidales_45_23 species=unknown genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
LSU ribosomal protein L12P
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_11
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18221..18733)
DNA (513bp) protein (171aa)
50S ribosomal protein L10 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000364C216
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(18751..19452)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003730BBF
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(19468..19917)
DNA (450bp) protein (150aa)
50S ribosomal protein L11 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000378188C
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_14
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19993..20535)
DNA (543bp) protein (181aa)
transcription antitermination protein NusG n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037CD16B
transcription anti-termination protein; K02601 transcriptional antiterminator NusG
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20559..20750)
DNA (192bp) protein (64aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035F9F33
secE; Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20952..22139)
DNA (1188bp) protein (396aa)
elongation factor Tu n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000379AE6A
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
tuf; translation elongation factor Tu; K02358 elongation factor Tu
SCNpilot_bf_inoc_scaffold_309_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22768..23064)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373640C
ribosomal subunit interface protein; K05808 putative sigma-54 modulation protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23077..23976)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036C1B3D
integrase, site-specific recombinase; K03733 integrase/recombinase XerC rbh
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_19
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24034..24225)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F1006
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_20
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(24552..25424)
DNA (873bp) protein (291aa)
Nodulin 21-related protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEH8_9SPIO
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC14217.1}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_309_curated_21
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25437..25847)
DNA (411bp) protein (137aa)
Flavodoxin n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E0G9_METRM
flavodoxin
Flavodoxin {ECO:0000313|EMBL:ADC46215.1}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
SCNpilot_bf_inoc_scaffold_309_curated_22
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26063..27979)
DNA (1917bp) protein (639aa)
Chaperone protein DnaK id=1903725 bin=GWD2_Bacteroidales_45_23 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
dnaK; molecular chaperone DnaK; K04043 molecular chaperone DnaK
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_23
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28412..29791
DNA (1380bp) protein (460aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036EE015
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_24
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29849..30763)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003826AD4
Metallophosphoesterase {ECO:0000313|EMBL:CDF15193.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
metallophosphoesterase
SCNpilot_bf_inoc_scaffold_309_curated_25
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30785..32581)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B302_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS14377.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
RagB/SusD domain-containing protein
SCNpilot_bf_inoc_scaffold_309_curated_26
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32593..36114)
DNA (3522bp) protein (1174aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5ZPC3_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN17624.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
TonB-dependent receptor plug
SCNpilot_bf_inoc_scaffold_309_curated_27
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36238..37260)
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037EE859
Fec operon regulator FecR {ECO:0000313|EMBL:AJW63612.1}; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
anti-FecI sigma factor FecR
SCNpilot_bf_inoc_scaffold_309_curated_28
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37455..38081
DNA (627bp) protein (209aa)
RNA polymerase sigma-70 factor, expansion family 1 n=3 Tax=Parabacteroides RepID=K5YTL2_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:KKB53423.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
SCNpilot_bf_inoc_scaffold_309_curated_29
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38300..40339
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036D39F9
outer membrane protein OmpA family protein; K03640 peptidoglycan-associated lipoprotein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_309_curated_30
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40382..41035
DNA (654bp) protein (218aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88]
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00035DA5AB
Peptide deformylase {ECO:0000256|RuleBase:RU003335, ECO:0000256|SAAS:SAAS00013131}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
Displaying items 1-30 of 103 in total

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