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SCNpilot_bf_inoc_scaffold_2018_curated_7

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 7798..9378

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain-containing protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J5D1_CYCMS similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 526.0
  • Bit_score: 841
  • Evalue 3.80e-241
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 526.0
  • Bit_score: 841
  • Evalue 1.20e-241
RagB/SusD domain-containing protein {ECO:0000313|EMBL:AEL27567.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 526.0
  • Bit_score: 841
  • Evalue 5.30e-241

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Taxonomy

Cyclobacterium marinum → Cyclobacterium → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1581
ATGTGCGCTGTGGCATTGACTGGATGCGATAGTTTTTTGGATAAACAGGACCCCACAGCCACCACTTTTGTGGAATTCTTCAATACGGAGGAAGATCTTCGACGCGTGGTTTACAGTAGTTATGTGGATGTATTTACAGCACCCAATAACAGACAAACCATTTTTTACATGGAAGAAGGTAAATCCGATAATGCCTACAGTCGTGTAGAAGGTTACCATCACCAACGAATTGCTAACGGCAATTTTAACAGCAATACAGCAGCCTTCTTGTTTTATTACGAGTTATCAATGAAGCATCTTGGACGTTTAAACACATTTATTGCCAATGCAGATGTTCCCTATGTGGAAAGTGAAGAGGTACGTCAAAAATATAAGAGTGTACTTGAAGCATTACGTATCTGGCACTACTTTAAGTTAACAGCCAGATGGGGAAATGTTCCTTTCCATTTGCAACCGGCCGATTTAAGTTCTGCGCTTCAACCAGCTACTCCCAAAGAGGAAATTTTGAATAAATTATTTCCTTTGGCCGAAGAGGTTGCAAGCCGACTGCCAGAAGACGAGTATACCACTAATAAGTATATGTTTAACCGCTATTCGTTAAAGGCTCTTACAATGAGGTATGCTCTATATAATGGCAGATACGAGCTGGCAGCAAATCTTGCAAAAGAGATTATGGACAGCAAGAAATACCAGTTATATCCTGTTTATAAAGACCTGTTCCAATATACAGCTGCCTCAAAAAACAAAGAGTTTATCATGCACTTTGACGCAGAAGCCCGAGGCAATGCTTCAACTTATTCGTTCCGCGATTTAGGTCCTCACTACCGTACCGGAGGTGGACAATCCTATACCGTTCCAACCAAATCGTTGGTAGATGCCTACTGGACTTTGCAAGGAAGACCGATTGATAAATGTCCGTTACATAGCAAGGAAGAGTATGAACTAAAGCCTACTCTAAACAGAGACCCTCGTTATTCTGCAAGCATTATGGGGCAAGGTGATAATTTTTACGGCGAGAAGATCGATATCTTCAACGAAAACAGTCCCATGTACTACGAAAAGGAAAGGGCCAGCAAGTCGGGCTATTGGTTTAGAAAGTATGTTGCAGATGCCGATGCATTTAAAAGCGGTGGTGCTGGAACCATGGATTTCGGTTTGTTAAGGTATGCCGAAGTATTGCTTACCTATGCCGAAGCCAAAATTATGCTGAACCAGGTGGATGATCTGGCTAAAAGCTGTATTAACCAAGTGAGAAGTCGTGCCGGTCTGGACATGACGGTTGCCGATGTTACCTTACCACTCTATGCAAATTATTCTCAGCAACAATGGATTGAGTTGATCCGTAATGAAAGAAGAATTGAGTTTGCAGGCGAAGGATTGCGCTACGACGACCTGATCAGATGGAAAATTGCAGAAACCGAACTTAATAAACCGGCTCTGGGGTATACTCAAAAGGTAAACGGCGAATTGGTTTCATTAAAAATTGAAGATCGTTCGTTCAAACCCTACAATTATTTGTGGCCGTTCCACGAAAACAGTCTTCGTGTTGAACCGGGTCTTACACAGAATCCTGGTTATTAA
PROTEIN sequence
Length: 527
MCAVALTGCDSFLDKQDPTATTFVEFFNTEEDLRRVVYSSYVDVFTAPNNRQTIFYMEEGKSDNAYSRVEGYHHQRIANGNFNSNTAAFLFYYELSMKHLGRLNTFIANADVPYVESEEVRQKYKSVLEALRIWHYFKLTARWGNVPFHLQPADLSSALQPATPKEEILNKLFPLAEEVASRLPEDEYTTNKYMFNRYSLKALTMRYALYNGRYELAANLAKEIMDSKKYQLYPVYKDLFQYTAASKNKEFIMHFDAEARGNASTYSFRDLGPHYRTGGGQSYTVPTKSLVDAYWTLQGRPIDKCPLHSKEEYELKPTLNRDPRYSASIMGQGDNFYGEKIDIFNENSPMYYEKERASKSGYWFRKYVADADAFKSGGAGTMDFGLLRYAEVLLTYAEAKIMLNQVDDLAKSCINQVRSRAGLDMTVADVTLPLYANYSQQQWIELIRNERRIEFAGEGLRYDDLIRWKIAETELNKPALGYTQKVNGELVSLKIEDRSFKPYNYLWPFHENSLRVEPGLTQNPGY*