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SCNpilot_bf_inoc_scaffold_2018_curated_9

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 9805..11424

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase A; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 541.0
  • Bit_score: 665
  • Evalue 1.20e-188
Pseudouridine synthase n=2 Tax=Parabacteroides RepID=N2B567_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 538.0
  • Bit_score: 666
  • Evalue 1.70e-188
RluA family pseudouridine synthase {ECO:0000313|EMBL:EOS13260.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 538.0
  • Bit_score: 666
  • Evalue 2.40e-188

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1620
ATGATACATTCTTTTCCCCAATCGGTTGAAACCTTTCCCTTACCGGAAAAGTTCACCTTCCCGTTCCATTATGAACCGCATCCGCTGTGTATTTCGGCGGCCAACGAGGTACAAGCTTACCTGAAGGAGCAGAAAGCGTGGACCGATGAGCTGCAGCAGGGAAAGATGTTCGGGGTACTGGTGGTACAGACTCCGGAAAATACGTTGGGATACCTGGCGGCCTTTTCGGGCAACCTGGACGGAAAAAGCTGTCACCCGTGGTTTGTTCCTCCCATCTGCGATTTTACAGATCCGGATGGCTTTTTCAGGGTGGAAGAGAGAAATATATCAGTGCTTAACAGCCGTATCGAAACATTGGAGAATGATCCGAAGTTCCTGCAGCTCAAAACACAACTTCAAGAAGCCATCGATGAGGCTGGTAACAAACTGGCTGATGCTAAAAAAGAGCTGAAAGCCGGGAAGGAGGCAAGGGATAAACGTAGAAAAGAGGGGTTGGATGAATGGAAAAACCATCAATTAATCCGCGAAAGTCAGTTTGCCAAAGCCGAATATAAACGGTTGGAGCGTTTCTGGCAAGAGAAGATTACACTTCTGAAGCAGAAAGTGGGTTTGTTTGTTCAGGAGATCGAATCTCTATGTTCGGAAAGGAAAACGCGTTCGGCAGCGCTGCAACAGCAATTATTTGATTGTTTTGTATTGATGAATGCCTACGGAGAGAGGAGAGCCTTGCGAACCGTATTTGAAGATGCTACCGGAAAGATACCTCCTGCCGGAGCGGGCGAATGTGCCGCACCAAAATTGTTGCAGTTTGCCTATATACATTCGTTGAAACCGATAGCCATGGCCGAATTCTGGTGGGGTGACTCGCCAAAGACGGAGATTCGCCGCCATGGGAATTATTATCCTGCCTGCAGCGGCAAATGCGGACCTATTCTTAATTTCATGTTGCAGGGGCTCACGGTGGAAGAGAATCCGCTGACGTGCGACAAGCACCGCCATTCATCGCCCGAGGTTGTGTATGAAGATGCCTGGATGGTAGCGGTAAACAAACCGGCCGGCATGTTGTCCGTTCCCGGAAAGCAAGCCGTTTATTCGGTGTACGACTGGATGAAAAGCAGCTACCCCGATGCCGATGGTCCGCTTATCGTTCACCGGTTGGATATGGCTACATCGGGACTCCTGTTGCTGGCTAAATCCAAAACGATTCACAAACAACTCCAAGCTATGTTCAAAAATCGCAAGATGGAGAAGCGTTACATCGCCATCGTGGATGGAGATTTGGATTGTACACAGGGAACGATAGAGCTTCCCCTTTGTCTGGATCCGGACGACCGGCCCCGGCAAATCGTTAATTACCAGCATGGCAAACCGGCCATTACCCGATACGAGGTTGTTCAGCATGAAACACATGGTATCCGGGTGGCTTTTTATCCCCAGACGGGCCGTACTCACCAGTTACGTGTTCATGCAGCGCACCCTTCCGGGTTGAATGCACCCATTGTGGGCGATTCCCTTTATGGGAAAGGGGGCGGCCGACTCTATCTTCATGCCGAGAGTCTTTCATTCAGGCATCCGGTAACCGGACAAGAGCTCTGTCTGCAAGCGAAAGCACCTTTTTAG
PROTEIN sequence
Length: 540
MIHSFPQSVETFPLPEKFTFPFHYEPHPLCISAANEVQAYLKEQKAWTDELQQGKMFGVLVVQTPENTLGYLAAFSGNLDGKSCHPWFVPPICDFTDPDGFFRVEERNISVLNSRIETLENDPKFLQLKTQLQEAIDEAGNKLADAKKELKAGKEARDKRRKEGLDEWKNHQLIRESQFAKAEYKRLERFWQEKITLLKQKVGLFVQEIESLCSERKTRSAALQQQLFDCFVLMNAYGERRALRTVFEDATGKIPPAGAGECAAPKLLQFAYIHSLKPIAMAEFWWGDSPKTEIRRHGNYYPACSGKCGPILNFMLQGLTVEENPLTCDKHRHSSPEVVYEDAWMVAVNKPAGMLSVPGKQAVYSVYDWMKSSYPDADGPLIVHRLDMATSGLLLLAKSKTIHKQLQAMFKNRKMEKRYIAIVDGDLDCTQGTIELPLCLDPDDRPRQIVNYQHGKPAITRYEVVQHETHGIRVAFYPQTGRTHQLRVHAAHPSGLNAPIVGDSLYGKGGGRLYLHAESLSFRHPVTGQELCLQAKAPF*