ggKbase home page

SCNpilot_bf_inoc_scaffold_2759_curated_10

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: 10534..11115

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UK01_TANFA similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 187.0
  • Bit_score: 228
  • Evalue 5.60e-57
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 187.0
  • Bit_score: 228
  • Evalue 1.70e-57
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:BAR49586.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 187.0
  • Bit_score: 228
  • Evalue 7.80e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tannerella forsythia → Tannerella → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
GTGCAAGTAGTAAACGAAAAAATTATCCATCAAATCAACAAAGGCGATTCAAGGGCATTTGAAGAGTTATACAATGCCTATTATGTCTATTTGTGTGCGGTGGCGACCAAATTTGTTTACGTACCCGAAATTGCGCAGGAGGTTGTTAACGATGTGTTTTTGCGTGTGTGGGAAAACCGGTCTACGTTGGTCTATCCATGTTCTTCTTACCTGATCCGTGCGGTACAGAACCGTTGTCTGAACCATTTGAAAAAGAGACAGCTGGAGGAGGTTTCGTTGTCGGATGTGGAGGATAATTTAATTGAATTCCAGAAACAACAGATAACCCAGGATGAGCATCCGCTGTCTTTTCTGGAGAATAAGGAGTTTGAGGAGACTGTGAACCGGGCAATTCAGAAGTTACCGGAAAAATGCCGTGAGATTTTTGAACAGTACCTCTACCTGAATCTTTCGTACGATGAGATTGCATCGTTGAATAAGATTACACCCAGCACCGTAAGAGGGCAGGTGCGGATCGCTCTTGCCAAGCTAAAAGAACAGCTCCGCCACTTTACCTTGTCTTTTTTCTCCTTTGTATACTGA
PROTEIN sequence
Length: 194
VQVVNEKIIHQINKGDSRAFEELYNAYYVYLCAVATKFVYVPEIAQEVVNDVFLRVWENRSTLVYPCSSYLIRAVQNRCLNHLKKRQLEEVSLSDVEDNLIEFQKQQITQDEHPLSFLENKEFEETVNRAIQKLPEKCREIFEQYLYLNLSYDEIASLNKITPSTVRGQVRIALAKLKEQLRHFTLSFFSFVY*