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SCNpilot_bf_inoc_scaffold_2759_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2759_curated_1
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(163..612)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5Z8F3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGN09924.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2759_curated_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(635..1063)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I8ZUT0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY73979.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2759_curated_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1329..1610)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KIA86777.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
Putative uncharacterized protein id=4401824 bin=GWF2_Bacteroidetes_40_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_2759_curated_4
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1696..2160)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SFN9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU25523.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
Activator of Hsp90 ATPase 1 family protein
SCNpilot_bf_inoc_scaffold_2759_curated_5
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2367..3908
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2R6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05784.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
glycoside hydrolase family protein
SCNpilot_bf_inoc_scaffold_2759_curated_6
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3949..4611
DNA (663bp) protein (221aa)
HAD family phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
HAD hydrolase, family IA, variant 1 n=4 Tax=Bacteroidales RepID=D0TCT5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KHM47541.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
SCNpilot_bf_inoc_scaffold_2759_curated_7
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4684..6165)
DNA (1482bp) protein (494aa)
Catalase (EC:1.11.1.6)
Catalase n=2 Tax=Porphyromonadaceae RepID=R7DHT3_9PORP
Catalase {ECO:0000313|EMBL:CDD90139.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
SCNpilot_bf_inoc_scaffold_2759_curated_8
unknown

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comp(6905..7597)
DNA (693bp) protein (231aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2759_curated_9
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8135..10279)
DNA (2145bp) protein (715aa)
bifunctional trehalose-6-phosphate synthase/HAD hydrolase; K16055 trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]
Glycosyltransferase family 20, candidate bifunctional trehalose-6-phosphate synthase/trehalose-6-phosphate phosphatase id=4280891 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
Tax=CG_Paludi_01
SCNpilot_bf_inoc_scaffold_2759_curated_10
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10534..11115
DNA (582bp) protein (194aa)
RNA polymerase sigma-70 factor n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UK01_TANFA
RNA polymerase sigma-70 factor
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:BAR49586.1}; TaxID=1307832 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia 3313.;"
SCNpilot_bf_inoc_scaffold_2759_curated_11
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11317..12330
DNA (1014bp) protein (338aa)
Putative anti-sigma factor n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LB58_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KKB49838.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
anti-sigma factor
SCNpilot_bf_inoc_scaffold_2759_curated_12
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12435..15713
DNA (3279bp) protein (1093aa)
Putative TonB-linked outer membrane protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IKA0_9PORP
Putative TonB-linked outer membrane protein {ECO:0000313|EMBL:CDB49715.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2759_curated_13
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16327..17397
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034AAAA0
Membrane protein {ECO:0000313|EMBL:KIC00046.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
RagB/SusD domain protein
SCNpilot_bf_inoc_scaffold_2759_curated_14
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17547..18947
DNA (1401bp) protein (467aa)
Alpha-N-acetylgalactosaminidase n=2 Tax=Parabacteroides RepID=E1YWL7_9PORP
Glycosyl hydrolase family 109 protein {ECO:0000313|EMBL:KKB47502.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
Gfo/Idh/MocA family oxidoreductase
SCNpilot_bf_inoc_scaffold_2759_curated_15
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19232..21718
DNA (2487bp) protein (829aa)
Two-component system sensor histidine kinase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6L9P9_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KKB54172.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
two-component system sensor histidine kinase
Displaying 15 items

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