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SCNpilot_bf_inoc_scaffold_741_curated_15

Organism: scnpilot_dereplicated_Bacteroidia_2

near complete RP 52 / 55 MC: 5 BSCG 50 / 51 MC: 5 ASCG 12 / 38 MC: 4
Location: comp(19545..20141)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Parabacteroides RepID=K6AQ27_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 190
  • Evalue 1.70e-45
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN17808.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 184.0
  • Bit_score: 190
  • Evalue 2.40e-45
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 175.0
  • Bit_score: 161
  • Evalue 3.50e-37

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGTTAACAGAAGATCTGAATATTGAAAACCAACAACAGGTGTGGGACCGTTTCAGGGAAGGAGACGATACCGCCTATTCTTTGATTTATAAAGAATATGCACATGTTATGTTTTCATTCGGCATGCGGTTTACTACTGACCGCGAACTGGTAAAAGACTGCATTCAGGACATTTTTGTGAAATTATACAGTAAAAGGCAGCAGCTTAACAGCACAGGCAGCATTAAATTTTATCTGCTTGTTGCCATGAAAAACGAACTATTCAATATTTTCAGGAAAAACATCACCTTTTATTCCATTCATACGATGGAGTACGACCTGGCGTCGGACATACAACTGGAAGACAAGCTTATCAGCGACGAAGAAAGTATTGAGCGGAACAATATGATCTCTCAGATTCTCGAAATACTTACACCCAGGCAGCGAGAGGTTATCTACTACCGATACATTGAGGAGCTTTCATTTGCAGAAATCGAACAACTTATGCAAATCAACGTTCAATCCATCCAGAACCTAATCCAGCGATCTATTAAAAAAGTAAGGGAAAAGTTTCCCGATTATGTACTGTATGCACTGTTCCCTATTATATTCCAATAA
PROTEIN sequence
Length: 199
MLTEDLNIENQQQVWDRFREGDDTAYSLIYKEYAHVMFSFGMRFTTDRELVKDCIQDIFVKLYSKRQQLNSTGSIKFYLLVAMKNELFNIFRKNITFYSIHTMEYDLASDIQLEDKLISDEESIERNNMISQILEILTPRQREVIYYRYIEELSFAEIEQLMQINVQSIQNLIQRSIKKVREKFPDYVLYALFPIIFQ*