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SCNpilot_bf_inoc_scaffold_741_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_741_curated_1
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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1..744
DNA (744bp) protein (248aa)
Creatininase id=2917196 bin=GWF2_Bacteroidetes_40_14 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
SCNpilot_bf_inoc_scaffold_741_curated_2
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(846..1301)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Bacteroides thetaiotaomicron dnLKV9 RepID=R9GZ02_BACT4
Uncharacterized protein {ECO:0000313|EMBL:EOR97001.1}; TaxID=1235785 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron dnLKV9.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_741_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1471..1893
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2I6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00087.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein; K03711 Fur family transcriptional regulator, ferric uptake regulator
SCNpilot_bf_inoc_scaffold_741_curated_4
unknown

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comp(1978..2214)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_741_curated_5
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2536..3741
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000362483C
Cation efflux system protein {ECO:0000313|EMBL:GAK37307.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
cation efflux system protein
SCNpilot_bf_inoc_scaffold_741_curated_6
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3798..6878
DNA (3081bp) protein (1027aa)
multidrug transporter AcrB n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000382BD86
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:GAK37306.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
cation efflux system protein
SCNpilot_bf_inoc_scaffold_741_curated_7
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6891..8066
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036F285D
Uncharacterized protein {ECO:0000313|EMBL:GAK37305.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_741_curated_8
unknown

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comp(8779..9111)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_741_curated_9
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9322..10020)
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000377CEC2
Uncharacterized protein {ECO:0000313|EMBL:EHP45514.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
PBS lyase HEAT-like repeat protein
SCNpilot_bf_inoc_scaffold_741_curated_10
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10017..11207)
DNA (1191bp) protein (397aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A272_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16264.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
oxidoreductase domain-containing protein
SCNpilot_bf_inoc_scaffold_741_curated_11
unknown

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12301..12540
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_741_curated_12
Bacteroides thetaiotaomicron, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12914..14740)
DNA (1827bp) protein (609aa)
SusD homolog n=1 Tax=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) RepID=Q8AAM4_BACTN
hypothetical protein rbh
SusD homolog {ECO:0000313|EMBL:AAO75547.1}; TaxID=226186 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC; 10582 / E50 / VPI-5482).;"
SCNpilot_bf_inoc_scaffold_741_curated_13
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14746..18102)
DNA (3357bp) protein (1119aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6AQ22_9PORP
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:KKB56851.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
Outer membrane receptor proteins, mostly Fe transport
SCNpilot_bf_inoc_scaffold_741_curated_14
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18226..19443)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YUB5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN17802.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
anti-sigma factor
SCNpilot_bf_inoc_scaffold_741_curated_15
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19545..20141)
DNA (597bp) protein (199aa)
Sigma-70 family RNA polymerase sigma factor n=3 Tax=Parabacteroides RepID=K6AQ27_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN17808.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
RNA polymerase ECF-type sigma factor
SCNpilot_bf_inoc_scaffold_741_curated_16
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20397..21599
DNA (1203bp) protein (401aa)
Glycosyl hydrolase family 88 n=1 Tax=Tannerella sp. CAG:118 RepID=R5I3D0_9PORP
Glucuronyl hydrolase {ECO:0000313|EMBL:KHM48671.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
glycosyl hydrolase family protein
SCNpilot_bf_inoc_scaffold_741_curated_17
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21848..23266
DNA (1419bp) protein (473aa)
Oxidoreductase domain protein id=4483215 bin=GWC2_Bacteroidetes_46_850 species=Niabella soli genus=Niabella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
dehydrogenase
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_bf_inoc_scaffold_741_curated_18
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23290..24645
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000373356B
Uncharacterized protein {ECO:0000313|EMBL:EGK02047.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Domain of Unknown Function (DUF1080).
SCNpilot_bf_inoc_scaffold_741_curated_19
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25087..25851)
DNA (765bp) protein (255aa)
Putative uncharacterized protein id=2085266 bin=GWE2_Bacteroidetes_42_39 species=Bacteroides sp. 1_1_30 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
DeoR family transcriptional regulator
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_741_curated_20
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26044..27621
DNA (1578bp) protein (526aa)
Putative uncharacterized protein id=4481063 bin=GWF2_Bacteroidetes_42_66 species=Bacteroides sp. 1_1_30 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
glycerol-3-phosphate dehydrogenase
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_741_curated_21
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27706..28617
DNA (912bp) protein (304aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase id=4975191 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_741_curated_22
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28622..29962
DNA (1341bp) protein (447aa)
glycerol-1-phosphate dehydrogenase (EC:1.1.1.261); K00096 glycerol-1-phosphate dehydrogenase [NAD(P)] [EC:1.1.1.261]
Putative uncharacterized protein n=1 Tax=Bacteroides eggerthii DSM 20697 RepID=B7AMA6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC52167.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
SCNpilot_bf_inoc_scaffold_741_curated_23
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30037..30708
DNA (672bp) protein (224aa)
Phosphoglycerate transporter n=2 Tax=Bacteroides eggerthii RepID=E5WVJ6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEC52168.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
sugar phosphate permease
SCNpilot_bf_inoc_scaffold_741_curated_24
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30722..31597
DNA (876bp) protein (292aa)
HAD-superfamily hydrolase, subfamily IIA id=4588468 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
HAD-superfamily hydrolase; K02566 NagD protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_741_curated_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31725..32498)
DNA (774bp) protein (258aa)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|SAAS:SAAS00064156}; EC=2.3.1.129 {ECO:0000256|SAAS:SAAS00001267};; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
UDP-N-acetylglucosamine acetyltransferase; K00677 UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
Acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZJL8_9PORP
SCNpilot_bf_inoc_scaffold_741_curated_26
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32506..32667)
DNA (162bp) protein (54aa)
Efflux transporter outer membrane factor (OMF) lipoprotein NodT family n=1 Tax=Alistipes sp. CAG:268 RepID=R6VS28_9BACT
Efflux transporter outer membrane factor (OMF) lipoprotein NodT family {ECO:0000313|EMBL:CDC97139.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
NodT family efflux transporter outer membrane lipoprotein
SCNpilot_bf_inoc_scaffold_741_curated_27
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33893..37084)
DNA (3192bp) protein (1064aa)
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Tannerella sp. CAG:118 RepID=R5IE79_9PORP
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:CCY38629.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_bf_inoc_scaffold_741_curated_28
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37111..38304)
DNA (1194bp) protein (398aa)
Efflux transporter RND family MFP subunit n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6FGE7_9PORP
Hemolysin D {ECO:0000313|EMBL:KIO45950.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
efflux transporter, RND family, MFP subunit; K03585 membrane fusion protein
SCNpilot_bf_inoc_scaffold_741_curated_29
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38516..39532)
DNA (1017bp) protein (339aa)
Oxidoreductase {ECO:0000313|EMBL:KJF44289.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
dth:DICTH_0598 oxidoreductase id=719160 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
Aldo/keto reductase
SCNpilot_bf_inoc_scaffold_741_curated_30
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39918..40511
DNA (594bp) protein (198aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2AQ07_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50526.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
hypothetical protein
Displaying 30 items

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