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SCNpilot_bf_inoc_scaffold_1226_curated

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1226_curated_31
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33894..34409)
DNA (516bp) protein (172aa)
GCN5-related N-acetyltransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBX2_ACIAP
GCN5-like N-acetyltransferase
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_bf_inoc_scaffold_1226_curated_32
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34413..36035)
DNA (1623bp) protein (541aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WB42_ACISJ
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABM43467.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_bf_inoc_scaffold_1226_curated_33
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36369..36872)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Brachymonas chironomi RepID=UPI00036D966D
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDS50929.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
MarR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1226_curated_34
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37144..38835
DNA (1692bp) protein (564aa)
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG20391.1}; EC=1.14.13.1 {ECO:0000313|EMBL:AJG20391.1};; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
pentachlorophenol monooxygenase (EC:1.14.13.50); K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037A3B4D
SCNpilot_bf_inoc_scaffold_1226_curated_35
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38847..39035
DNA (189bp) protein (63aa)
Putative uncharacterized protein id=1269734 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_bf_inoc_scaffold_1226_curated_36
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39127..40446
DNA (1320bp) protein (440aa)
fumarylacetoacetase (EC:3.7.1.2); K01555 fumarylacetoacetase [EC:3.7.1.2]
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002EF96DA
Fumarylacetoacetase {ECO:0000313|EMBL:KJA11791.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
SCNpilot_bf_inoc_scaffold_1226_curated_37
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40506..41720
DNA (1215bp) protein (405aa)
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000361B0FA
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_1226_curated_38
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41820..42119
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y5W0_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93994.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_1226_curated_39
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42116..42964
DNA (849bp) protein (283aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXL9_9BURK
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EHL22829.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
enoyl-CoA hydratase/isomerase
SCNpilot_bf_inoc_scaffold_1226_curated_40
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42968..43825)
DNA (858bp) protein (286aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" sour
queF; 7-cyano-7-deazaguanine reductase; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
7-cyano-7-deazaguanine reductase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000315E98A
SCNpilot_bf_inoc_scaffold_1226_curated_41
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43822..44730)
DNA (909bp) protein (303aa)
Alpha/beta hydrolase fold protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VS35_POLNA
alpha/beta hydrolase fold protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_1226_curated_42
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44784..45632)
DNA (849bp) protein (283aa)
hypothetical protein; K00472 prolyl 4-hydroxylase [EC:1.14.11.2]
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y6C6_RAMTT
Uncharacterized protein {ECO:0000313|EMBL:AEG94000.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_1226_curated_43
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45642..46415)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037641E2
UPF0246 protein AVS7_02182 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1226_curated_44
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46426..47115
DNA (690bp) protein (230aa)
tRNA pseudouridine synthase C (EC:5.4.99.-); K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26]
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E71CC6
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_bf_inoc_scaffold_1226_curated_45
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47123..48139)
DNA (1017bp) protein (339aa)
TRAP-type transport system n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSH4_9BURK
TRAP-type transport system {ECO:0000313|EMBL:EIK92164.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1226_curated_46
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48859..48990
DNA (132bp) protein (44aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE24408.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
SCNpilot_bf_inoc_scaffold_1226_curated_47
unknown

Not on your lists

49036..49176
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1226_curated_48
unknown

Not on your lists

49354..49689
DNA (336bp) protein (112aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1226_curated_49
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49822..50802)
DNA (981bp) protein (327aa)
C4-dicarboxylate ABC transporter substrate-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000363E0BF
TRAP-type uncharacterized transport system, periplasmic component {ECO:0000313|EMBL:GAD22787.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
TRAP transporter solute receptor TAXI family protein; K07080
SCNpilot_bf_inoc_scaffold_1226_curated_50
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50837..52171)
DNA (1335bp) protein (445aa)
hypothetical protein; K00837 [EC:2.6.1.-]
UPI0003A438B8 related cluster n=1 Tax=unknown RepID=UPI0003A438B8
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000313|EMBL:GAD22788.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_bf_inoc_scaffold_1226_curated_51
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52209..52982)
DNA (774bp) protein (258aa)
3-hydroxybutyrate dehydrogenase; K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Comamonas testosteroni S44 RepID=D8DCL5_COMTE
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:KGH29580.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_bf_inoc_scaffold_1226_curated_52
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53164..53805)
DNA (642bp) protein (214aa)
3-oxoacid CoA-transferase subunit B (EC:2.8.3.5); K01029 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
Butyryl-CoA:acetate CoA transferase n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WL45_VEREI
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_bf_inoc_scaffold_1226_curated_53
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53822..54523)
DNA (702bp) protein (234aa)
UPI0001DE8F38 related cluster id=1266623 bin=GWE1_Burkholderiales_65_30 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
3-oxoacid CoA-transferase subunit A
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_1226_curated_54
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54615..55211
DNA (597bp) protein (199aa)
Transcriptional regulator, LuxR family n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQN3_POLNA
putative PAS/PAC sensor protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_bf_inoc_scaffold_1226_curated_55
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55281..55568)
DNA (288bp) protein (96aa)
carboxymuconolactone decarboxylase; K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
Carboxymuconolactone decarboxylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1P8_9BURK
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:EHL21420.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
SCNpilot_bf_inoc_scaffold_1226_curated_56
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55689..56282
DNA (594bp) protein (198aa)
Peroxidase-like enzyme id=1266627 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
peroxidase-like protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_1226_curated_57
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56469..59873
DNA (3405bp) protein (1135aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
CRISPR-associated protein, Csn1 family n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9X8_ACIET
crispr-associated protein, csn1 family; K09952 hypothetical protein
SCNpilot_bf_inoc_scaffold_1226_curated_58
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59860..60150
DNA (291bp) protein (97aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9X7_ACIET
hypothetical protein
Displaying items 31-58 of 58 in total

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