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SCNpilot_bf_inoc_scaffold_1226_curated_44

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 46426..47115

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase C (EC:5.4.99.-); K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26] similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 253.0
  • Bit_score: 240
  • Evalue 6.90e-61
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E71CC6 similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 229.0
  • Bit_score: 301
  • Evalue 6.10e-79
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 228.0
  • Bit_score: 326
  • Evalue 2.50e-86

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Taxonomy

RIFOXYC12_FULL_Burkholderiales_65_23_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
TTGTACCAGGACGCACAGCTCGTCGCCATCGACAAGCCCGCGGGCCTGCTGGTGCACCGCACGGGGCTGGACGCCGGCGAAACGCGCTTTGCCGTGCAGCTGCTGCGCGAGCAGATCGGCCGCCCGGTGTGGCCGGCGCACCGCCTGGACAAGGGCACCAGCGGCGTGCTGCTGTTCGCGCTCGATGCCGCCACCGCCGCTGCGCTGGCGCAGGCCTGGACGGGCGACGCCGTGCGCAAGACCTACGTCGCCATGGTGCGCGGCTGGCCGCCGGACGAAGGCCTGGTCGACCACCCGCTGGCGCGCCTGCCGGACGACGCGCGCAGCGCGCGCGGCATCGAATGCCAGCCGGCCATGACGCGCTTTCGCACGCTGCAGCGCCTGGCGCTGCCGCTGCCCGATCGCGGGTTCGATGACACCCGCTGCGCCCGACTTGAACTGGAACCCGTCACCGGCCGCCGCCACCAGCTGCGCCGCCACTGCAAGCACATGGCGCATCCCATCATCGGCGACGCCACGCACGGCAAGGGGGTGCTGAACCGGGCGCTGGCCGCGCTGCTGGGCACGCAGCGGCTGTGGCTGCATGCGCAGGCGCTGGTGCTGGATCACCCCGCCAGCGGCGCCCCCTTGCGCATCGAGGCTGCGCCCGGCCCCGAGTGGGGCCTGTGGGCGCCGTGGGCGCGTCCGTAG
PROTEIN sequence
Length: 230
LYQDAQLVAIDKPAGLLVHRTGLDAGETRFAVQLLREQIGRPVWPAHRLDKGTSGVLLFALDAATAAALAQAWTGDAVRKTYVAMVRGWPPDEGLVDHPLARLPDDARSARGIECQPAMTRFRTLQRLALPLPDRGFDDTRCARLELEPVTGRRHQLRRHCKHMAHPIIGDATHGKGVLNRALAALLGTQRLWLHAQALVLDHPASGAPLRIEAAPGPEWGLWAPWARP*