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SCNpilot_bf_inoc_scaffold_1543_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1543_curated_1
unknown

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comp(2..94)
DNA (93bp) protein (31aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1543_curated_2
Pseudoxanthomonas spadix, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(133..1617)
DNA (1485bp) protein (495aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UN51_PSEUP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AER56555.1}; TaxID=1045855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas spadix (strain BD-a59).;"
SCNpilot_bf_inoc_scaffold_1543_curated_3
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1627..3102)
DNA (1476bp) protein (492aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HX03_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES52632.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1543_curated_4
Desulfobulbus propionicus, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3099..5240)
DNA (2142bp) protein (714aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RJ12_DESPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW18589.1}; TaxID=577650 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3).;"
SCNpilot_bf_inoc_scaffold_1543_curated_5
Pseudomonas balearica, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5237..5446)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00035EF9B5
DNA-binding protein {ECO:0000313|EMBL:AJE14430.1}; TaxID=1123016 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas balearica DSM 6083.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1543_curated_6
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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5687..6142
DNA (456bp) protein (152aa)
recombinase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003792E3F
DNA-invertase hin {ECO:0000313|EMBL:KFB76669.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
site-specific integrase protein
SCNpilot_bf_inoc_scaffold_1543_curated_7
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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6139..6564
DNA (426bp) protein (142aa)
Putative bacteriophage-related protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WDB1_RALSL
Uncharacterized protein {ECO:0000313|EMBL:EXI92779.1}; TaxID=1454005 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
bacteriophage-like protein
SCNpilot_bf_inoc_scaffold_1543_curated_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6919..8265)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2J5_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92358.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_1543_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8375..9448
DNA (1074bp) protein (358aa)
Peptidoglycan-binding domain 1 protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TTN2_ALIDB
peptidoglycan-binding domain 1 protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADV01618.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_1543_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9634..10506)
DNA (873bp) protein (291aa)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Curvibacter lanceolatus RepID=UPI00035E0606
2-hydroxy-3-oxopropionate reductase-like
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_1543_curated_11
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10636..11511
DNA (876bp) protein (292aa)
hypothetical protein; K01432 arylformamidase [EC:3.5.1.9]
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CU0_POLSJ
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_1543_curated_12
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11591..12502)
DNA (912bp) protein (304aa)
guaC; Guanosine monophosphate reductase; K00364 GMP reductase [EC:1.7.1.7]
GMP reductase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2J9_RAMTT
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_bf_inoc_scaffold_1543_curated_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12649..13476)
DNA (828bp) protein (276aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27) id=12552738 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_1543_curated_14
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13742..14296
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KXQ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGI75332.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
UPF0065 protein in clcB-clcD intergenic region-like
SCNpilot_bf_inoc_scaffold_1543_curated_15
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14334..14654
DNA (321bp) protein (107aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00037E9751
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_1543_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14746..15804
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000381F14A
signal transduction histidine kinase LytS
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_1543_curated_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15801..16634
DNA (834bp) protein (278aa)
LytTr DNA-binding region protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXM3_ALIDB
lyttr DNA-binding region protein
Lyttr DNA-binding region protein {ECO:0000313|EMBL:GAO24369.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_bf_inoc_scaffold_1543_curated_18
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16783..17154)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Acidovorax RepID=A1W6C7_ACISJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM33560.1}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_1543_curated_19
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17371..19194
DNA (1824bp) protein (608aa)
glutaminyl-tRNA synthetase; K01886 glutaminyl-tRNA synthetase [EC:6.1.1.18]
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Glutaminyl-tRNA synthetase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTP4_VARPS
Displaying 19 items

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