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SCNpilot_bf_inoc_scaffold_763_curated

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Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_763_curated_31
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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28448..28915
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA06_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA28924.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
CBS domain-containing protein
SCNpilot_bf_inoc_scaffold_763_curated_32
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29049..30113
DNA (1065bp) protein (355aa)
chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
chorismate synthase n=1 Tax=Brachymonas chironomi RepID=UPI0003763ED0
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_763_curated_33
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30176..31591
DNA (1416bp) protein (472aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Candidate histidine kinase, classic n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y088_RAMTT
histidine kinase
SCNpilot_bf_inoc_scaffold_763_curated_34
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(31533..32138)
DNA (606bp) protein (202aa)
Candidate response regulator, NarL n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y089_RAMTT
response regulator NarL
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_763_curated_35
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32245..33558)
DNA (1314bp) protein (438aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Tryptophan--tRNA ligase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TTH0_ACIAC
SCNpilot_bf_inoc_scaffold_763_curated_36
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33563..34231)
DNA (669bp) protein (223aa)
Peptidase M50 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12ET6_POLSJ
peptidase M50
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_bf_inoc_scaffold_763_curated_37
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(34271..34894)
DNA (624bp) protein (208aa)
translation factor Sua5 n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0003045DAC
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EIK90520.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
SCNpilot_bf_inoc_scaffold_763_curated_38
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(34960..35823)
DNA (864bp) protein (288aa)
PHP domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTT5_9BURK
PHP domain-containing protein {ECO:0000313|EMBL:EHL24351.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
PHP domain-containing protein; K07053
SCNpilot_bf_inoc_scaffold_763_curated_39
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(35875..37299)
DNA (1425bp) protein (475aa)
amidase (EC:3.5.1.4)
UPI0003D3D79D related cluster n=1 Tax=unknown RepID=UPI0003D3D79D
Amidase {ECO:0000313|EMBL:GAD24086.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_bf_inoc_scaffold_763_curated_40
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(37375..38862)
DNA (1488bp) protein (496aa)
ABC transporter substrate-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037C6A20
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_bf_inoc_scaffold_763_curated_41
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38921..39739)
DNA (819bp) protein (273aa)
Candidate ABC type dipeptide/oligopeptide transport system, ATP-binding component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYT2_RAMTT
dipeptide/oligopeptide ABC transporter; K02032 peptide/nickel transport system ATP-binding protein
Candidate ABC type dipeptide/oligopeptide transport system, ATP-binding component {ECO:0000313|EMBL:AEG94449.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_763_curated_42
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(39739..40749)
DNA (1011bp) protein (337aa)
Oligopeptide/dipeptide ABC transporter ATPase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BYD6_9BURK
ABC transporter {ECO:0000313|EMBL:KJA09919.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
dipeptide/oligopeptide ABC transporter; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_763_curated_43
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41020..41523)
DNA (504bp) protein (168aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036DDBC9
PIN domain-containing protein; K07065
SCNpilot_bf_inoc_scaffold_763_curated_44
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41529..41795)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037F2C8E
Uncharacterized protein {ECO:0000313|EMBL:GAD24081.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_bf_inoc_scaffold_763_curated_45
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41839..42714)
DNA (876bp) protein (292aa)
Candidate ABC type dipeptide/oligopeptide transport system, permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYT0_RAMTT
dipeptide/oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
Candidate ABC type dipeptide/oligopeptide transport system, permease component {ECO:0000313|EMBL:AEG94447.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_763_curated_46

Not on your lists

comp(42770..43717)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DZ04_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD99008.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_763_curated_47
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43892..44881)
DNA (990bp) protein (330aa)
Inner membrane ABC transporter permease protein yliC n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RLM6_COMTE
ABC transporter permease {ECO:0000313|EMBL:KGH32018.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_bf_inoc_scaffold_763_curated_48
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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44947..45198
DNA (252bp) protein (84aa)
ferredoxin n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002E7CE0A
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ABM96178.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
SCNpilot_bf_inoc_scaffold_763_curated_49
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45250..47589)
DNA (2340bp) protein (780aa)
cell division protein FtsK n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036201DE
Cell divisionftsk/spoiiie {ECO:0000313|EMBL:GAD20600.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
SCNpilot_bf_inoc_scaffold_763_curated_50
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47646..48320)
DNA (675bp) protein (225aa)
Transcriptional regulator, CRP family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXE2_RAMTT
CRP family transcriptional regulator
Transcriptional regulator, CRP family-like protein {ECO:0000313|EMBL:AEG94277.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_763_curated_51
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48462..49424
DNA (963bp) protein (321aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Thioredoxin reductase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEB6_ACIET
SCNpilot_bf_inoc_scaffold_763_curated_52
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


49607..49840
DNA (234bp) protein (78aa)
50S ribosomal protein L28 n=1 Tax=Ideonella sp. B508-1 RepID=UPI000344A43E
ribosomal protein l28; K02902 large subunit ribosomal protein L28
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_763_curated_53
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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49862..50032
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KW06_9BURK
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
SCNpilot_bf_inoc_scaffold_763_curated_54
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50488..51798
DNA (1311bp) protein (437aa)
Integrase family protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7H9_ALIDK
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEB85509.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_763_curated_55
Comamonadaceae bacterium B1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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51814..52137
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZW8_THIK1
Phage-related protein {ECO:0000313|EMBL:BAO83139.1}; TaxID=1458426 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium B1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_763_curated_56
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52134..52412
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000376E676
XRE family transcriptional regulator
Tax=CG_Rhodof_04
SCNpilot_bf_inoc_scaffold_763_curated_57
unknown

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52566..53120
DNA (555bp) protein (185aa)

This feature has no annotations

Displaying items 31-57 of 57 in total

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