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SCNpilot_bf_inoc_scaffold_1569_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1569_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..613
DNA (612bp) protein (204aa)
Group 1 glycosyl transferase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I1V9_9BURK
group 1 glycosyl transferase
Group 1 glycosyl transferase {ECO:0000313|EMBL:AFU45174.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_1569_curated_2
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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807..2321
DNA (1515bp) protein (505aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00030B54D3
Uncharacterized protein {ECO:0000313|EMBL:EON19592.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. GA3-3.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1569_curated_3
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2318..3556
DNA (1239bp) protein (413aa)
Predicted glycosyl transferase n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K593_CUPNH
Glycosyl transferase {ECO:0000313|EMBL:KGH06018.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
rfaG2; glycosyl transferase
SCNpilot_bf_inoc_scaffold_1569_curated_4
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3778..4863
DNA (1086bp) protein (362aa)
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KHL70807.1}; EC=5.1.3.2 {ECO:0000313|EMBL:KHL70807.1};; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
UDP-glucose 4-epimerase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTT9_9DELT
galE; UDP-glucose 4-epimerase
SCNpilot_bf_inoc_scaffold_1569_curated_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4884..6020
DNA (1137bp) protein (379aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA88_ACISJ
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABM43163.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_bf_inoc_scaffold_1569_curated_6
Pseudomonas sp. M47T1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6093..6323
DNA (231bp) protein (77aa)
SpoVT/AbrB-like protein n=1 Tax=Pseudomonas sp. M47T1 RepID=I4MYF5_9PSED
SpoVT/AbrB-like protein {ECO:0000313|EMBL:EIK94245.1}; TaxID=1179778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. M47T1.;"
virulence-assiciated protein MvpT
SCNpilot_bf_inoc_scaffold_1569_curated_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6326..6727
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=32042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri ATCC 14405 = CCUG 16156.;"
Ribonuclease VapC n=1 Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7F0V0_PSEST
mvpA; hypothetical protein; K07062
SCNpilot_bf_inoc_scaffold_1569_curated_8
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6811..7953
DNA (1143bp) protein (381aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ABM43166.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ABM43166.1};; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA91_ACISJ
SCNpilot_bf_inoc_scaffold_1569_curated_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7957..9210
DNA (1254bp) protein (418aa)
Glycosyl transferase, group 1 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA92_ACISJ
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABM43167.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_bf_inoc_scaffold_1569_curated_10
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9868..10458
DNA (591bp) protein (197aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:ABM43168.1}; EC=2.7.8.6 {ECO:0000313|EMBL:ABM43168.1};; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA93_ACISJ
SCNpilot_bf_inoc_scaffold_1569_curated_11
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10483..10746
DNA (264bp) protein (88aa)
plasmid stabilization protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002375E75
Uncharacterized protein {ECO:0000313|EMBL:CEJ66599.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
COG0238: Ribosomal protein S18
SCNpilot_bf_inoc_scaffold_1569_curated_12
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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11181..11843
DNA (663bp) protein (221aa)
Putative acetyl transferase protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZJF3_THASP
acetyl transferase protein
Putative acetyl transferase protein {ECO:0000313|EMBL:ACK53886.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
SCNpilot_bf_inoc_scaffold_1569_curated_13
Thauera aminoaromatica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12470..12709
DNA (240bp) protein (80aa)
Putative virulence-associated protein n=1 Tax=Thauera aminoaromatica S2 RepID=N6XVU7_9RHOO
Putative virulence-associated protein {ECO:0000313|EMBL:ENO74347.1}; TaxID=1234381 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera aminoaromatica S2.;"
putative virulence-associated protein
SCNpilot_bf_inoc_scaffold_1569_curated_14
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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12709..13110
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.;"
Ribonuclease VapC n=1 Tax=Thauera phenylacetica B4P RepID=N6ZRM9_9RHOO
PIN (PilT N terminus) domain; K07062
Displaying 14 items

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