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SCNpilot_bf_inoc_scaffold_4195_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_4195_curated_1
unknown

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comp(3..113)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_4195_curated_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(260..385)
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9Z8_PELHB
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
50S ribosomal protein L36; K02919 large subunit ribosomal protein L36
SCNpilot_bf_inoc_scaffold_4195_curated_3
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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797..1090
DNA (294bp) protein (98aa)
Chemotaxis protein CheYIII n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSL6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KKC33646.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
two-component response regulator
SCNpilot_bf_inoc_scaffold_4195_curated_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1111..2118)
DNA (1008bp) protein (336aa)
Oligopeptide transport ATP-binding protein OppF n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA00_PELHB
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KFC69766.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
oligopeptide transport ATP-binding protein OppF; K10823 oligopeptide transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_4195_curated_5
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2118..3101)
DNA (984bp) protein (328aa)
Oligopeptide transport ATP-binding protein OppD n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA01_PELHB
Oligopeptide transporter ATP-binding component {ECO:0000313|EMBL:KKB10955.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
oligopeptide transport ATP-binding protein OppD; K15583 oligopeptide transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_4195_curated_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3118..4035)
DNA (918bp) protein (306aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Rhizobium sp. AP16 RepID=J2WS51_9RHIZ
Oligopeptide transport system permease protein Opp C {ECO:0000313|EMBL:CDP52880.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
oppC; oligopeptide ABC transporter; K02034 peptide/nickel transport system permease protein
SCNpilot_bf_inoc_scaffold_4195_curated_7
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4035..4958)
DNA (924bp) protein (308aa)
ABC transporter n=1 Tax=Aureimonas ureilytica RepID=UPI0003665265
Oligopeptide transport system permease protein Opp B {ECO:0000313|EMBL:CDP52879.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
transmembrane component of ABC transporter protein; K15581 oligopeptide transport system permease protein
SCNpilot_bf_inoc_scaffold_4195_curated_8
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5082..5462)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI00037BE8C3
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:KFC69770.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
family 5 extracellular solute-binding protein; K15580 oligopeptide transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_4195_curated_9
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5505..5780)
DNA (276bp) protein (92aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000360ECA3
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKB10953.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
periplasmic oligopeptide-binding protein
Displaying 9 items

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