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SCNpilot_bf_inoc_scaffold_331_curated

Search features with annotation key words

Displaying items 61-82 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_331_curated_61
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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68995..69819
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T670_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60019.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_331_curated_62
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

69872..70189
DNA (318bp) protein (106aa)
NAD(P) transhydrogenase subunit alpha part 2; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase, subunit alpha part 2 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX55_LEPCP
NAD(P) transhydrogenase, subunit alpha part 2 {ECO:0000313|EMBL:ACB32701.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
SCNpilot_bf_inoc_scaffold_331_curated_63
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

70202..71635
DNA (1434bp) protein (478aa)
NAD(P) transhydrogenase subunit beta (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLT5_METPP
SCNpilot_bf_inoc_scaffold_331_curated_64
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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71794..73500
DNA (1707bp) protein (569aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Acidovorax sp. CF316 RepID=J0U3J3_9BURK
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EJE50692.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
SCNpilot_bf_inoc_scaffold_331_curated_65
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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73525..74313
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000316830D
putative MTA/SAH nucleosidase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_331_curated_66
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(74406..75392)
DNA (987bp) protein (329aa)
Magnesium/cobalt transport protein CorA n=1 Tax=Variovorax paradoxus B4 RepID=T1X5L6_VARPD
corA1; magnesium/cobalt transport protein CorA
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
SCNpilot_bf_inoc_scaffold_331_curated_67
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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75736..76068
DNA (333bp) protein (111aa)
ribosome hibernation promoting factor n=1 Tax=Acidovorax radicis RepID=UPI0002378697
sigma 54 modulation protein/ribosomal protein S30EA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
SCNpilot_bf_inoc_scaffold_331_curated_68
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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76304..76774
DNA (471bp) protein (157aa)
PTS system, enzyme IIA Ntr; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69]
Candidate PTS system, enzyme IIA Ntr n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y410_RAMTT
Candidate PTS system, enzyme IIA Ntr {ECO:0000313|EMBL:AEG91288.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_331_curated_69
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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76827..77783
DNA (957bp) protein (319aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hpr kinase/phosphorylase; K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
HPr kinase n=1 Tax=Curvibacter lanceolatus RepID=UPI00036BDBC0
SCNpilot_bf_inoc_scaffold_331_curated_70
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(77910..78437)
DNA (528bp) protein (176aa)
Candidate transcriptional regulator Fur (Ferric uptake regulation protein), Fur family n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y412_RAMTT
fur; transcriptional regulator Fur; K03711 Fur family transcriptional regulator, ferric uptake regulator
Candidate transcriptional regulator Fur (Ferric uptake regulation protein), Fur family {ECO:0000313|EMBL:AEG91290.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_331_curated_71
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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78481..78996
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00035F8750
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
SmpA/OmlA domain-containing protein; K06186 small protein A
SCNpilot_bf_inoc_scaffold_331_curated_72
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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79051..79866
DNA (816bp) protein (272aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122Q1_POLSJ
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
SCNpilot_bf_inoc_scaffold_331_curated_73
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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79888..80520
DNA (633bp) protein (211aa)
Biopolymer transport protein n=1 Tax=Polaromonas sp. CF318 RepID=J2L5G4_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EJL80468.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
SCNpilot_bf_inoc_scaffold_331_curated_74
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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80661..81110
DNA (450bp) protein (150aa)
Biopolymer transport protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CXF9_9BURK
Biopolymer transport protein {ECO:0000313|EMBL:EJL80469.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR
SCNpilot_bf_inoc_scaffold_331_curated_75
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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81237..83930
DNA (2694bp) protein (898aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TW41_ALIDB
SCNpilot_bf_inoc_scaffold_331_curated_76
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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83937..84434
DNA (498bp) protein (166aa)
Rare lipoprotein B n=1 Tax=Polaromonas sp. CF318 RepID=J3CXV5_9BURK
rare lipoprotein B; K03643 LPS-assembly lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_bf_inoc_scaffold_331_curated_77
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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84605..85672
DNA (1068bp) protein (356aa)
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q9A4_ACIAP
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ADX48349.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_bf_inoc_scaffold_331_curated_78
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

85729..87051
DNA (1323bp) protein (441aa)
Gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycli
Gamma-glutamyl phosphate reductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G9A2_ALIDK
SCNpilot_bf_inoc_scaffold_331_curated_79
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(87168..87551)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LKH1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ08839.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_331_curated_80
unknown

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comp(87615..88988)
DNA (1374bp) protein (458aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_331_curated_81
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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89695..90354
DNA (660bp) protein (220aa)
LuxR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377528
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_bf_inoc_scaffold_331_curated_82
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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90360..91667
DNA (1308bp) protein (436aa)
signal transduction histidine kinase n=1 Tax=Acidovorax radicis RepID=UPI0002377529
signal transduction histidine kinase
Tax=GWA2_Burkholderiales_64_37_curated
Displaying items 61-82 of 82 in total

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