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SCNpilot_bf_inoc_scaffold_742_curated

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Displaying items 91-120 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_742_curated_91
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95958..96356)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Rheinheimera perlucida RepID=UPI000377597D
Uncharacterized protein {ECO:0000313|EMBL:EON90847.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lipolyticus SM19.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_742_curated_92
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96437..97348
DNA (912bp) protein (304aa)
Peptidase S1 and S6 chymotrypsin/Hap n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBA1_ACIAP
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADX44963.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_bf_inoc_scaffold_742_curated_93
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97374..98393
DNA (1020bp) protein (340aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSB5_POLNA
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABM38543.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_bf_inoc_scaffold_742_curated_94
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98424..99440
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2UEE4_9BURK
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_742_curated_95
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99474..100568
DNA (1095bp) protein (365aa)
Mg-chelatase subunit ChlD n=1 Tax=Variovorax sp. CF313 RepID=J3CF67_9BURK
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:EJL70191.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
von willebrand factor type a; K07114 uncharacterized protein
SCNpilot_bf_inoc_scaffold_742_curated_96
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100988..103519
DNA (2532bp) protein (844aa)
Magnesium-transporting ATPase, P-type 1 (Mg(2+) transport ATPase, P-type 1) {ECO:0000313|EMBL:CAZ87271.1}; EC=3.6.3.2 {ECO:0000313|EMBL:CAZ87271.1};; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As).;"
mgtA; Magnesium-transporting ATPase, P-type 1 (Mg(2+) transport ATPase, P-type 1) (EC:3.6.3.2)
Magnesium-transporting ATPase, P-type 1 (Mg(2+) transport ATPase, P-type 1) n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CRN0_THIA3
SCNpilot_bf_inoc_scaffold_742_curated_97
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103697..105280)
DNA (1584bp) protein (528aa)
Carboxyl transferase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QU46_9BURK
Carboxyl transferase {ECO:0000313|EMBL:ETF03152.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
propionyl-CoA carboxylase
SCNpilot_bf_inoc_scaffold_742_curated_98
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105277..106266)
DNA (990bp) protein (330aa)
Uncharacterized protein n=2 Tax=Comamonas testosteroni RepID=B7X491_COMTE
TctC; K07795 putative tricarboxylic transport membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_bf_inoc_scaffold_742_curated_99
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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106420..106638
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QDH2_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW89029.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
biotin/lipoyl attachment domain-containing protein
SCNpilot_bf_inoc_scaffold_742_curated_100
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

106635..108191
DNA (1557bp) protein (519aa)
Fatty-acid--CoA ligase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QID6_RALPI
Fatty-acid--CoA ligase {ECO:0000313|EMBL:AGW89031.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
AMP-dependent synthetase and ligase
SCNpilot_bf_inoc_scaffold_742_curated_101
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108195..108935)
DNA (741bp) protein (247aa)
GntR family transcriptional regulator n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUX4_9BURK
GntR family transcriptional regulator {ECO:0000313|EMBL:ETF03148.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
GntR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_742_curated_102
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109040..109708)
DNA (669bp) protein (223aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
lipoprotein releasing system ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-]
Lipoprotein releasing system, ATP-binding protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSC5_POLNA
SCNpilot_bf_inoc_scaffold_742_curated_103
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(109764..111032)
DNA (1269bp) protein (423aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21TG2_RHOFD
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_742_curated_104
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111098..112048
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MEF2_ACIET
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM34191.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_742_curated_105
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112045..113754
DNA (1710bp) protein (570aa)
recJ; single-stranded DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Candidate single-stranded DNA-specific exonuclease n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXZ3_RAMTT
Candidate single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:AEG94318.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_742_curated_106
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113875..114648
DNA (774bp) protein (258aa)
oxidoreductase fad/NAD(P)-binding domain-containing protein; K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2]
Oxidoreductase FAD/NAD(P)-binding domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MAK9_ACIET
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:ACM31656.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_742_curated_107
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114735..115241)
DNA (507bp) protein (169aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 10749
Phosphopantetheine adenylyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U1B3_ALIDB
SCNpilot_bf_inoc_scaffold_742_curated_108
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115288..115899)
DNA (612bp) protein (204aa)
putative methyltransferase; K00599 [EC:2.1.1.-]
Putative methyltransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TTX7_ACIAC
Putative methyltransferase {ECO:0000313|EMBL:ABM34415.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_bf_inoc_scaffold_742_curated_109
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116034..116579
DNA (546bp) protein (182aa)
Hemerythrin HHE cation-binding domain-containing protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTG7_9BURK
hemerythrin HHE cation-binding domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_742_curated_110
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116648..117472)
DNA (825bp) protein (275aa)
enoyl-CoA hydratase n=1 Tax=Acidovorax radicis RepID=UPI0002376D85
enoyl-CoA hydratase/isomerase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_bf_inoc_scaffold_742_curated_111
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117610..118818)
DNA (1209bp) protein (403aa)
zinc protease protein; K01422 [EC:3.4.99.-]
Zinc protease protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYU6_RAMTT
Zinc protease protein-like protein {ECO:0000313|EMBL:AEG94463.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_742_curated_112
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119012..120322)
DNA (1311bp) protein (437aa)
Zinc protease protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYU7_RAMTT
zinc protease protein
Zinc protease protein-like protein {ECO:0000313|EMBL:AEG94464.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_742_curated_113
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120597..121583
DNA (987bp) protein (329aa)
selD; Selenium donor protein; K01008 selenide, water dikinase [EC:2.7.9.3]
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Selenide, water dikinase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZB6_RAMTT
SCNpilot_bf_inoc_scaffold_742_curated_114
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121594..122742
DNA (1149bp) protein (383aa)
Signal recognition particle receptor FtsY n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF07_ACIET
signal recognition particle-docking protein ftsy; K03110 fused signal recognition particle receptor
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_742_curated_115
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

122808..123899
DNA (1092bp) protein (364aa)
pyridine nucleotide-disulfide oxidoreductase family protein id=5082581 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_742_curated_116
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123988..124764)
DNA (777bp) protein (259aa)
IclR family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MGR5_9BURK
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_742_curated_117
BJP_IG2103_Dechloromonas_60_92, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

124885..126081
DNA (1197bp) protein (399aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2); K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VNI3_POLNA
Tax=BJP_IG2103_Dechloromonas_60_92
SCNpilot_bf_inoc_scaffold_742_curated_118
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126243..127151
DNA (909bp) protein (303aa)
Uncharacterized protein id=1265362 bin=GWE1_Burkholderiales_65_30 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
L-carnitine dehydratase/bile acid-inducible protein F
Tax=GWE1_Burkholderiales_65_30_curated
SCNpilot_bf_inoc_scaffold_742_curated_119

Not on your lists

comp(127255..128040)
DNA (786bp) protein (262aa)
TPR repeat protein n=1 Tax=uncultured bacterium RepID=C6KUM4_9BACT
TPR repeat protein {ECO:0000313|EMBL:BAH89672.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_742_curated_120

Not on your lists

comp(128037..128693)
DNA (657bp) protein (219aa)
TetR family transcriptional regulator n=1 Tax=uncultured bacterium RepID=C6KUM3_9BACT
TetR family transcriptional regulator {ECO:0000313|EMBL:BAH89671.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
TetR family transcriptional regulator
Displaying items 91-120 of 138 in total

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