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SCNpilot_bf_inoc_scaffold_1321_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1321_curated_1
unknown

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1..186
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1321_curated_2
Asticcacaulis sp. YBE204, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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388..909
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. YBE204 RepID=V4QIV6_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:ESQ79093.1}; TaxID=1282363 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. YBE204.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1321_curated_3
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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902..1420
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RA45_CUPTR
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
SCNpilot_bf_inoc_scaffold_1321_curated_4
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1504..2820)
DNA (1317bp) protein (439aa)
Esterase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IA72_9BURK
esterase
Esterase {ECO:0000313|EMBL:AFU48199.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_1321_curated_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2951..4798)
DNA (1848bp) protein (616aa)
poly(3-hydroxyalkanoate) synthetase; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly(3-hydroxyalkanoate) synthetase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHT5_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_bf_inoc_scaffold_1321_curated_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5089..6504
DNA (1416bp) protein (472aa)
Coenzyme F390 synthetase-like protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6J9_ACIDE
coenzyme F390 synthetase-like protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_1321_curated_7
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6862..8058)
DNA (1197bp) protein (399aa)
Major facilitator transporter n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6YVX5_9RHOO
Major facilitator transporter {ECO:0000313|EMBL:ENO86572.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
arabinose efflux permease family protein
SCNpilot_bf_inoc_scaffold_1321_curated_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8184..9119)
DNA (936bp) protein (312aa)
branched-chain amino acid transferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E1467
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:GAD21350.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
class IV aminotransferase
SCNpilot_bf_inoc_scaffold_1321_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9133..9462)
DNA (330bp) protein (110aa)
thioredoxin domain-containing protein id=12552254 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
thioredoxin domain containing protein; K03671 thioredoxin 1
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_1321_curated_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9590..11923
DNA (2334bp) protein (778aa)
cytochrome P450 n=1 Tax=Curvibacter lanceolatus RepID=UPI0003796C06
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:KCV62010.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
cytochrome P450
SCNpilot_bf_inoc_scaffold_1321_curated_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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12024..12833
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B41FEF
UspA domain-containing protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
SCNpilot_bf_inoc_scaffold_1321_curated_12
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12853..14199)
DNA (1347bp) protein (449aa)
molybdenum cofactor synthesis domain-containing protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
Molybdopterin molybdochelatase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C397_9BURK
Molybdenum cofactor biosynthesis protein MoaA {ECO:0000313|EMBL:KJA11642.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
SCNpilot_bf_inoc_scaffold_1321_curated_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14196..14720)
DNA (525bp) protein (175aa)
GCN5-related N-acetyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVU8_ALIDB
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADU99493.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_1321_curated_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14733..15383)
DNA (651bp) protein (217aa)
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A; K03752 molybdopterin-guanine dinucleotide biosynthesis protein A [EC:2.7.7.77]
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
Molybdenum cofactor guanylyltransferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0K5_RAMTT
SCNpilot_bf_inoc_scaffold_1321_curated_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15440..16579)
DNA (1140bp) protein (380aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5L9_ACIDE
moaA; molybdenum cofactor biosynthesis protein A
SCNpilot_bf_inoc_scaffold_1321_curated_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16604..17200
DNA (597bp) protein (199aa)
thioredoxin n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B6AAA3
thioredoxin-like protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
SCNpilot_bf_inoc_scaffold_1321_curated_17
Burkholderia sp. lig30, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17200..18543
DNA (1344bp) protein (448aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;"
dsdA; D-serine dehydratase (EC:4.3.1.18); K01753 D-serine dehydratase [EC:4.3.1.18] rbh
Probable D-serine dehydratase n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=SDHD_CHRVO rbh
SCNpilot_bf_inoc_scaffold_1321_curated_18
unknown

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comp(18952..19137)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1321_curated_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20783..21841
DNA (1059bp) protein (353aa)
DNA methyltransferase/helicase n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AMX0_9BACT
DNA methyltransferase {ECO:0000313|EMBL:GAN45512.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
N-6 DNA methylase
SCNpilot_bf_inoc_scaffold_1321_curated_20
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22112..22801
DNA (690bp) protein (230aa)
Calcium-binding EF-hand-containing protein n=2 Tax=Comamonas testosteroni RepID=B7WZJ8_COMTE
hypothetical protein
Calcium-binding EF-hand-containing protein {ECO:0000313|EMBL:EED66239.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_bf_inoc_scaffold_1321_curated_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22946..24439)
DNA (1494bp) protein (498aa)
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
aldehyde dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00037C95A0
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ADU36724.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
Displaying 21 items

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