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SCNpilot_bf_inoc_scaffold_585_curated

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Displaying items 1-30 of 196 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_585_curated_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(241..888)
DNA (648bp) protein (216aa)
Elongation factor G n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=EFG_ACIET rbh
elongation factor g; K02355 elongation factor G
Elongation factor G {ECO:0000255|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000255|HAMAP-Rule:MF_00054};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_585_curated_2

Not on your lists

1420..2199
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E3Q0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE00519.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_bf_inoc_scaffold_585_curated_3
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2360..2830)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Limnohabitans RepID=UPI000312303B
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7
SCNpilot_bf_inoc_scaffold_585_curated_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3004..3381)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y581_RAMTT
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_585_curated_5
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3591..4751)
DNA (1161bp) protein (387aa)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acidovorax sp. CF316 RepID=J0UCG4_9BURK
beta-lactamase
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_585_curated_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4822..5463)
DNA (642bp) protein (214aa)
alpha/beta hydrolase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003602C6F
Predicted hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:GAD21126.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
putative transmembrane protein; K07018
SCNpilot_bf_inoc_scaffold_585_curated_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5548..5889)
DNA (342bp) protein (114aa)
ferredoxin, 2Fe-2S-like id=12551798 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
(2Fe-2S) ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_585_curated_8
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6154..7254)
DNA (1101bp) protein (367aa)
Candidate membrane protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y577_RAMTT
membrane protein
Candidate membrane protein {ECO:0000313|EMBL:AEG91387.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_585_curated_9
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7270..7698)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000376F382
Predicted membrane protein {ECO:0000313|EMBL:BAO81981.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
hypothetical protein; K08973 putative membrane protein
SCNpilot_bf_inoc_scaffold_585_curated_10
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7986..8996
DNA (1011bp) protein (337aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hemB; Delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
delta-aminolevulinic acid dehydratase n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000380F97F
SCNpilot_bf_inoc_scaffold_585_curated_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9059..10192
DNA (1134bp) protein (378aa)
Candidate Mg2+ and Co2+ transporter n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4R6_RAMTT
corA; Mg2+ and Co2+ transporter
Candidate Mg2+ and Co2+ transporter {ECO:0000313|EMBL:AEG91384.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_585_curated_12
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10203..11165
DNA (963bp) protein (321aa)
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2L123_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EJL78968.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
LysR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_585_curated_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11430..12119)
DNA (690bp) protein (230aa)
carboxymethylenebutenolidase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003626547
carboxymethylenebutenolidase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_585_curated_14
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12327..12800
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000377E96C
MaoC domain-containing protein dehydratase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_585_curated_15
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12829..12999)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BST6_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_bf_inoc_scaffold_585_curated_16
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13119..13280)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039597C2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX38611.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_585_curated_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13360..14013)
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CY55_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS16959.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_bf_inoc_scaffold_585_curated_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14022..15011)
DNA (990bp) protein (330aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Acidovorax sp. CF316 RepID=J1EDB6_9BURK
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:EJE50269.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_585_curated_19
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15016..15870)
DNA (855bp) protein (285aa)
Candidate ABC transporter, ATP-binding component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4Q3_RAMTT
ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein
Candidate ABC transporter, ATP-binding component {ECO:0000313|EMBL:AEG91371.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_585_curated_20
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16118..17296)
DNA (1179bp) protein (393aa)
Putative integral membrane protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CY21_9BURK
Putative integral membrane protein {ECO:0000313|EMBL:EJL80829.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein; K02066 putative ABC transport system permease protein
SCNpilot_bf_inoc_scaffold_585_curated_21
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17435..18031
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3I4_ACIAP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
SCNpilot_bf_inoc_scaffold_585_curated_22
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18102..18764
DNA (663bp) protein (221aa)
Putative lipoprotein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q123Z1_POLSJ
Putative lipoprotein {ECO:0000313|EMBL:CDS51961.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
putative lipoprotein
SCNpilot_bf_inoc_scaffold_585_curated_23
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18710..19432)
DNA (723bp) protein (241aa)
UPI0003CFAFD4 related cluster n=1 Tax=unknown RepID=UPI0003CFAFD4
Uncharacterized protein {ECO:0000313|EMBL:ESZ19259.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_bf_inoc_scaffold_585_curated_24
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19441..20628
DNA (1188bp) protein (396aa)
glucose-methanol-choline oxidoreductase; K00108 choline dehydrogenase [EC:1.1.99.1]
Glucose-methanol-choline oxidoreductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W2M8_ACISJ
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_585_curated_25
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20977..21738)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PWT6_9RHOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL26585.1}; TaxID=748247 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
SCNpilot_bf_inoc_scaffold_585_curated_26
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22029..22721
DNA (693bp) protein (231aa)
Uncharacterized membrane protein yjbE n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YD27_9BURK
Uncharacterized membrane protein yjbE {ECO:0000313|EMBL:CBA30940.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
integral membrane protein TerC
SCNpilot_bf_inoc_scaffold_585_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22753..23097
DNA (345bp) protein (115aa)
Uncharacterized protein n=4 Tax=Delftia RepID=A9BQ95_DELAS
hypothetical protein; K08972 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ABX33505.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_585_curated_28
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23182..24822)
DNA (1641bp) protein (547aa)
peptidase M48 n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00035D96C1
Peptidase M48 {ECO:0000313|EMBL:KJA12285.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
peptidase M48 Ste24p
SCNpilot_bf_inoc_scaffold_585_curated_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24906..25418
DNA (513bp) protein (171aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUR2_9BURK
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
molybdenum cofactor biosynthesis protein C
SCNpilot_bf_inoc_scaffold_585_curated_30
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25430..26968
DNA (1539bp) protein (513aa)
O-antigen polymerase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q122I7_POLSJ
O-antigen polymerase
O-antigen polymerase {ECO:0000313|EMBL:ABE46555.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying items 1-30 of 196 in total

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