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SCNpilot_bf_inoc_scaffold_906_curated

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_906_curated_1
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

698..1396
DNA (699bp) protein (233aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AKP4_PSEAI
hypothetical protein
Conjugal transfer protein {ECO:0000313|EMBL:KIZ37075.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_bf_inoc_scaffold_906_curated_2
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1377..1826
DNA (450bp) protein (150aa)
Conjugal transfer protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AVN7_PSEAI
putative lipoprotein
Putative uncharacterized protein {ECO:0000313|EMBL:EED38243.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_bf_inoc_scaffold_906_curated_3
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1826..4735
DNA (2910bp) protein (970aa)
Conjugal transfer protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AXQ5_PSEAI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED37744.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_bf_inoc_scaffold_906_curated_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4778..5515
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N8A3_PSEAI
dsba oxidoreductase
Uncharacterized protein {ECO:0000313|EMBL:ABX36811.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_906_curated_5
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5702..6196
DNA (495bp) protein (165aa)
DNA repair protein RadC n=4 Tax=Proteobacteria RepID=A9C308_DELAS
DNA repair protein RadC; K03630 DNA repair protein RadC
DNA repair protein radC homolog {ECO:0000313|EMBL:CAP44612.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_bf_inoc_scaffold_906_curated_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6341..6787
DNA (447bp) protein (149aa)
Uncharacterized protein n=6 Tax=Proteobacteria RepID=A9C309_DELAS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED38669.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_bf_inoc_scaffold_906_curated_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6784..7731
DNA (948bp) protein (316aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=G2UBI5_PSEAI
Conjugal transfer protein {ECO:0000313|EMBL:AKE71632.1}; Uncharacterized protein {ECO:0000313|EMBL:BAQ41809.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_8
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7742..9160
DNA (1419bp) protein (473aa)
Uncharacterized protein n=4 Tax=Gammaproteobacteria RepID=G4LMS7_PSEAI
hypothetical protein
Conjugal transfer protein {ECO:0000313|EMBL:KIZ37068.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_bf_inoc_scaffold_906_curated_9
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9157..9528
DNA (372bp) protein (124aa)
Uncharacterized protein n=4 Tax=Proteobacteria RepID=A9C312_DELAS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED37182.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_bf_inoc_scaffold_906_curated_10
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9544..11064
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3U0_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60861.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11076..11441)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa MH27 RepID=V6ADV7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CDM23722.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11468..11926)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NBT4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:GAD20418.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_13
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11926..12243)
DNA (318bp) protein (106aa)
AbrB family transcriptional regulator n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ARQ1_PSEAI
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:AFU56922.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
SCNpilot_bf_inoc_scaffold_906_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13793..14338
DNA (546bp) protein (182aa)
Integrating conjugative element relaxase, PFGI-1 class n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N8B2_PSEAI
relaxase
Pseudomonas stutzeri DSM 4166, complete genome {ECO:0000313|EMBL:AEA83148.1}; TaxID=996285 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A).;"
SCNpilot_bf_inoc_scaffold_906_curated_15
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14371..14958)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AVQ3_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EGC17472.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_16
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15090..17132)
DNA (2043bp) protein (681aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NBT7_PSEAI
PglZ domain protein {ECO:0000313|EMBL:KIN92511.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;"
alkaline phosphatase domain-containing protein
SCNpilot_bf_inoc_scaffold_906_curated_17
Pseudomonas tuomuerensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17129..19939)
DNA (2811bp) protein (937aa)
Helicase n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ARP2_PSEAI
Helicase {ECO:0000313|EMBL:KHO64304.1}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;"
helicase domain-containing protein
SCNpilot_bf_inoc_scaffold_906_curated_18
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19936..20988)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N8B7_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPR34560.1}; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_19
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20989..21258)
DNA (270bp) protein (90aa)
Transcriptional regulator n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N872_9BURK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGX87602.1}; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Candidatus Symbiobacter mobilis CR.;"
SCNpilot_bf_inoc_scaffold_906_curated_20
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21258..21833)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Pseudomonas stutzeri RepID=UPI0002F8830F
Uncharacterized protein {ECO:0000313|EMBL:GAD63449.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_21
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24034..24702)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8NAV8_PSEAI
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
SCNpilot_bf_inoc_scaffold_906_curated_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24695..26038)
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AIQ0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KGH12938.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_23
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26039..28171)
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=Pseudomonas stutzeri CCUG 29243 RepID=I4CQZ8_PSEST
Type IV secretory pathway, VirB4 component {ECO:0000313|EMBL:EXI82566.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_24
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28168..29538)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AVP4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EXI82567.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-92.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_25
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29575..33327)
DNA (3753bp) protein (1251aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N8C1_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EGK72092.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_26
Kingella denitrificans, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33363..33836)
DNA (474bp) protein (158aa)
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5ARN2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EGC17467.1}; TaxID=888741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella denitrificans ATCC 33394.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_906_curated_27
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33841..34455)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa VRFPA04 RepID=U5AQK3_PSEAI
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EED39878.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_bf_inoc_scaffold_906_curated_28
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35022..35912
DNA (891bp) protein (297aa)
LysR family transcriptional regulator n=1 Tax=Pseudomonas stutzeri (strain DSM 4166 / CMT.9.A) RepID=F2MX33_PSEU6
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:KIZ33601.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
LysR family transcriptional regulator
Displaying 28 items

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