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SCNpilot_bf_inoc_scaffold_1129_curated

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1129_curated_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..234)
DNA (234bp) protein (78aa)
MFS transporter n=1 Tax=Acidovorax radicis RepID=UPI00023770C6
major facilitator superfamily transporter; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_bf_inoc_scaffold_1129_curated_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1611..2174)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5T6_ALIDK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB85343.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2236..3474)
DNA (1239bp) protein (413aa)
Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AEB85342.1}; EC=2.1.1.79 {ECO:0000313|EMBL:AEB85342.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5T5_ALIDK
SCNpilot_bf_inoc_scaffold_1129_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3477..4289)
DNA (813bp) protein (271aa)
UPI0003D3E6ED related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI0003D3E6ED
Uncharacterized protein {ECO:0000313|EMBL:GAD24969.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein; K09701 hypothetical protein
SCNpilot_bf_inoc_scaffold_1129_curated_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4286..5590)
DNA (1305bp) protein (435aa)
NADH-ubiquinone oxidoreductase subunit 6 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000379B597
Fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein {ECO:0000313|EMBL:GAD24968.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
SCNpilot_bf_inoc_scaffold_1129_curated_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5711..6685
DNA (975bp) protein (325aa)
Cobalamin B12-binding domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5T2_ALIDK
cobalamin B12-binding domain-containing protein
Cobalamin B12-binding domain protein {ECO:0000313|EMBL:AEB85339.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7305..8852
DNA (1548bp) protein (516aa)
DNA photolyase FAD-binding protein; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
DNA photolyase FAD-binding protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5T0_ALIDK
DNA photolyase FAD-binding protein {ECO:0000313|EMBL:AEB85337.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_8
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9014..10324
DNA (1311bp) protein (437aa)
DNA photolyase, FAD-binding protein; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
DNA photolyase, FAD-binding protein n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0J731_COMT2
Cryptochrome, DASH family {ECO:0000313|EMBL:EXU81775.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
SCNpilot_bf_inoc_scaffold_1129_curated_9
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10321..11862
DNA (1542bp) protein (514aa)
deoxyribodipyrimidine photo-lyase n=1 Tax=Brachymonas chironomi RepID=UPI00036B91F2
deoxyribodipyrimidine photolyase-like protein; K06876 deoxyribodipyrimidine photolyase-related protein
Deoxyribodipyrimidine photolyase-related protein {ECO:0000313|EMBL:AEB85335.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_10
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11880..12578
DNA (699bp) protein (233aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5S7_ALIDK
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEB85334.1}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12616..13518
DNA (903bp) protein (301aa)
NAD-dependent dehydratase n=1 Tax=Brachymonas chironomi RepID=UPI00035FEAF5
NAD-dependent epimerase/dehydratase; K07071
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEB85333.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13577..14131)
DNA (555bp) protein (185aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5S5_ALIDK
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_13
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14564..15076
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N8Z6_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ27677.1}; TaxID=452652 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
SCNpilot_bf_inoc_scaffold_1129_curated_14
Metarhizium majus, Metarhizium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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15089..15325
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Metarhizium acridum (strain CQMa 102) RepID=E9EHC1_METAQ
PKD domain-containing protein {ECO:0000313|EMBL:KID82717.1}; Flags: Fragment;; TaxID=1276143 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; Metarhizium; Metarhizium majus.;" source="Metarhizium majus ARSEF 297.;"
SCNpilot_bf_inoc_scaffold_1129_curated_15
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15426..15923
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I3E1_9BURK
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
SCNpilot_bf_inoc_scaffold_1129_curated_16
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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15994..16338
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVE3_ACCPU
Uncharacterized protein {ECO:0000313|EMBL:EXI69130.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1129_curated_17
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16349..17236)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5S0_ALIDK
LysR family transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB85327.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_18
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17337..18905
DNA (1569bp) protein (523aa)
NADH/Ubiquinone/plastoquinone (complex I); K05577 NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5R9_ALIDK
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:AEB85326.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_1129_curated_19
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18930..21503
DNA (2574bp) protein (858aa)
UPF0753 protein Alide2_2978 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5R8_ALIDK
UPF0753 protein Alide2_2978 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
hypothetical protein; K09822 hypothetical protein
SCNpilot_bf_inoc_scaffold_1129_curated_20
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21562..22566
DNA (1005bp) protein (335aa)
ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Ferrochelatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5R6_ALIDK
SCNpilot_bf_inoc_scaffold_1129_curated_21
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22581..23360)
DNA (780bp) protein (260aa)
Uncharacterized protein n=11 Tax=Pseudomonas aeruginosa RepID=U8CBZ0_PSEAI
Type VI secretion protein {ECO:0000313|EMBL:ETD48014.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
hypothetical protein
Displaying 21 items

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