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SCNpilot_bf_inoc_scaffold_1243_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1243_curated_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..299)
DNA (297bp) protein (99aa)
multidrug transporter AcrB n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037BF9D7
CzcA family heavy metal efflux protein {ECO:0000313|EMBL:GAD24195.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
CzcA family heavy metal efflux protein; K07239 heavy-metal exporter, HME family
SCNpilot_bf_inoc_scaffold_1243_curated_2
unknown

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970..1929
DNA (960bp) protein (320aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_1243_curated_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2058..2612)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003735572
Uncharacterized protein {ECO:0000313|EMBL:GAD24193.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2718..3971)
DNA (1254bp) protein (418aa)
UPI00039A90CD related cluster n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00039A90CD
Uncharacterized protein {ECO:0000313|EMBL:GAD24192.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4633..4968)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT42_ALIDB
Uncharacterized protein {ECO:0000313|EMBL:GAO23353.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5113..5799
DNA (687bp) protein (229aa)
Heavy metal response regulator n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TT43_ALIDB
Two component heavy metal response transcriptional regulator {ECO:0000313|EMBL:GAO23354.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
heavy metal response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
SCNpilot_bf_inoc_scaffold_1243_curated_7
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5928..7148
DNA (1221bp) protein (407aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
heavy metal sensor kinase; K07644 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
Heavy metal sensor kinase n=1 Tax=Ralstonia sp. PBA RepID=I9KS01_9RALS
SCNpilot_bf_inoc_scaffold_1243_curated_8
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7108..9348)
DNA (2241bp) protein (747aa)
heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
Heavy metal translocating P-type ATPase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WTL1_COMTE
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EED67417.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
SCNpilot_bf_inoc_scaffold_1243_curated_9
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9443..9886
DNA (444bp) protein (148aa)
Cd(II)/Pb(II)-responsive transcriptional regulator n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WMF2_9BURK
Mercuric resistance operon regulatory protein {ECO:0000313|EMBL:EWS61543.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
MerR family transcriptional regulator
SCNpilot_bf_inoc_scaffold_1243_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10661..11128
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X8M5_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD41542.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11198..13180)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=7 Tax=Pseudomonas aeruginosa RepID=M3B7P9_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:CEI13049.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_12
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13629..14228)
DNA (600bp) protein (200aa)
Conjugative transfer signal peptidase TraF n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WFB2_PSEAI
Peptidase {ECO:0000313|EMBL:KIL02506.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
putative conjugal transfer TRAF transmembrane protein
SCNpilot_bf_inoc_scaffold_1243_curated_13
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14225..14770)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WJ93_PSEAI
Transposase {ECO:0000313|EMBL:KIL02507.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_14
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14767..15030)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8WC70_PSEAI
ParB partition protein {ECO:0000313|EMBL:KIL02519.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1243_curated_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15027..15665)
DNA (639bp) protein (213aa)
ATPase involved in plasmid partitioning n=2 Tax=Burkholderiaceae RepID=Q1LNY6_RALME
ATPase {ECO:0000313|EMBL:KIL02520.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
parA; ATPase involved in plasmid partitioning; K03496 chromosome partitioning protein
Displaying 15 items

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