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SCNpilot_bf_inoc_scaffold_1742_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_1742_curated_1
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..741)
DNA (741bp) protein (247aa)
topB1; DNA topoisomerase III 1 (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2]
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
DNA topoisomerase n=2 Tax=Pseudomonas aeruginosa RepID=E2ZUG0_PSEAI
SCNpilot_bf_inoc_scaffold_1742_curated_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1011..1451)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YXY4_PSEAI
ssb6; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_1742_curated_3
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1525..2055)
DNA (531bp) protein (177aa)
Uncharacterized protein n=5 Tax=Pseudomonas aeruginosa RepID=G2UBM0_PSEAI
Integrase {ECO:0000313|EMBL:AKE71597.1}; Putative integrase regulator R protein {ECO:0000313|EMBL:BAQ41772.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
putative integrase regulator R protein
SCNpilot_bf_inoc_scaffold_1742_curated_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2052..2837)
DNA (786bp) protein (262aa)
Integrating conjugative element protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8Z1V1_PSEAI
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EED40157.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
SCNpilot_bf_inoc_scaffold_1742_curated_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3155..4399)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=G2UBM2_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:BAQ41770.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_1742_curated_6
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4403..4963)
DNA (561bp) protein (187aa)
Coproporphyrinogen III oxidase n=2 Tax=Pseudomonas aeruginosa RepID=U5AXL8_PSEAI
coproporphyrinogen III oxidase
Uncharacterized protein {ECO:0000313|EMBL:CAP44659.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_bf_inoc_scaffold_1742_curated_7
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4979..6607)
DNA (1629bp) protein (543aa)
Integrating conjugative element, PFGI_1 class, ParB family protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8YXY0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KIZ38132.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
transcriptional regulators
SCNpilot_bf_inoc_scaffold_1742_curated_8
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6600..6848)
DNA (249bp) protein (83aa)
Cobyrinic acid a,c-diamide synthase n=2 Tax=Pseudomonas aeruginosa RepID=U5AKK8_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP44661.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_bf_inoc_scaffold_1742_curated_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6832..7707)
DNA (876bp) protein (292aa)
Cobyrinic acid a,c-diamide synthase n=2 Tax=Pseudomonas aeruginosa RepID=U5ATJ0_PSEAI
cobyrinic acid ac-diamide synthase; K12055 chromosome partitioning related protein ParA
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:ABX36773.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_1742_curated_10
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7750..7962)
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=5 Tax=Proteobacteria RepID=A9C2W8_DELAS
alpA; phage transcriptional regulator AlpA; K07733 prophage regulatory protein
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABX36772.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_1742_curated_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8081..8836)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa X13273 RepID=U8Z606_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIZ38128.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
SCNpilot_bf_inoc_scaffold_1742_curated_12
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9406..11334)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA026 RepID=U8N7W5_PSEAI
Integrase {ECO:0000313|EMBL:EED37049.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
integrase
Displaying 12 items

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