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SCNpilot_bf_inoc_scaffold_460_curated

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_460_curated_1
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..264)
DNA (264bp) protein (88aa)
SAM-dependent methyltransferase PhcB n=1 Tax=Variovorax paradoxus RepID=UPI00036F7EE5
Uncharacterized protein {ECO:0000313|EMBL:EJL72371.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
type 11 methyltransferase
SCNpilot_bf_inoc_scaffold_460_curated_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

436..2415
DNA (1980bp) protein (660aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3X2_ACIDE
SCNpilot_bf_inoc_scaffold_460_curated_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2592..3518
DNA (927bp) protein (309aa)
Lytic transglycosylase, catalytic n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TLU4_ACIAC
lytic transglycosylase catalytic subunit
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABM31932.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
SCNpilot_bf_inoc_scaffold_460_curated_4
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3678..3929
DNA (252bp) protein (84aa)
DNA topoisomerase IV subunit A (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MES2_ACIET
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_460_curated_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3943..6018
DNA (2076bp) protein (692aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
DNA topoisomerase IV subunit A (EC:5.99.1.3); K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W4S9_ACISJ
SCNpilot_bf_inoc_scaffold_460_curated_6
unknown

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6015..6212
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6288..7106)
DNA (819bp) protein (273aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
UPI00039ED855 related cluster n=1 Tax=unknown RepID=UPI00039ED855
PpiC-type peptidyl-prolyl cis-trans isomerase
SCNpilot_bf_inoc_scaffold_460_curated_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7161..7427)
DNA (267bp) protein (89aa)
bola family protein; K05527 BolA protein id=12553256 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
bola family protein; K05527 BolA protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_460_curated_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7427..7984)
DNA (558bp) protein (186aa)
Probable intracellular septation protein A n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KVG2_9BURK
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
intracellular septation protein A
SCNpilot_bf_inoc_scaffold_460_curated_10
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7998..8408)
DNA (411bp) protein (137aa)
methionine-r-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
Methionine-R-sulfoxide reductase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TU28_ALIDB
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_460_curated_11
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8405..9889)
DNA (1485bp) protein (495aa)
UPF0061 protein Bpro_2581 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Y2581_POLSJ rbh
Selenoprotein O and cysteine-containing homologs {ECO:0000313|EMBL:CDS49796.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_460_curated_12
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9990..11627
DNA (1638bp) protein (546aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26); K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
long-chain fatty acid--CoA ligase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B9BC7
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:GAD23194.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
SCNpilot_bf_inoc_scaffold_460_curated_13
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11734..12972
DNA (1239bp) protein (413aa)
Candidate ABC type branched chain amino acid transport systems, periplasmic component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXW9_RAMTT
branched chain amino acid ABC transporter periplasmic protein; K01999 branched-chain amino acid transport system substrate-binding protein
Candidate ABC type branched chain amino acid transport systems, periplasmic component {ECO:0000313|EMBL:AEG93104.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_460_curated_14
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13062..14084
DNA (1023bp) protein (341aa)
Candidate ABC type branched chain amino acid transport systems, permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXW8_RAMTT
branched chain amino acid ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
Candidate ABC type branched chain amino acid transport systems, permease component {ECO:0000313|EMBL:AEG93103.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_460_curated_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14091..15377
DNA (1287bp) protein (429aa)
Candidate ABC type branched chain amino acid transport systems, permease component n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXW7_RAMTT
branched chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Candidate ABC type branched chain amino acid transport systems, permease component {ECO:0000313|EMBL:AEG93102.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_460_curated_16
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15374..16147
DNA (774bp) protein (258aa)
ABC transporter {ECO:0000313|EMBL:EIK90097.1}; EC=3.6.1.3 {ECO:0000313|EMBL:EIK90097.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
ABC transporter n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLK7_9BURK
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_460_curated_17
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16150..16845
DNA (696bp) protein (232aa)
ABC transporter related protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QD23_ACIAP
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ADX46267.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
SCNpilot_bf_inoc_scaffold_460_curated_18
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17134..19245
DNA (2112bp) protein (704aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Curvibacter lanceolatus RepID=UPI00035F4F27
putative fatty acid oxidation complex, subunit alpha
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_460_curated_19
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19403..20578
DNA (1176bp) protein (392aa)
acetyl-CoA acetyltransferase (EC:2.3.1.16); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:ADX46275.1}; EC=2.3.1.16 {ECO:0000313|EMBL:ADX46275.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Acetyl-CoA acetyltransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QD31_ACIAP
SCNpilot_bf_inoc_scaffold_460_curated_20
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21186..21455)
DNA (270bp) protein (90aa)
Toxin RelG {ECO:0000313|EMBL:EXJ09142.1}; EC=3.1.-.- {ECO:0000313|EMBL:EXJ09142.1};; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
Putative uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 849 str. F0330 RepID=G9PRA4_9ACTO
addiction module toxin, RelE/StbE family; K06218 RelE protein
SCNpilot_bf_inoc_scaffold_460_curated_21
unknown

Not on your lists

comp(21452..21763)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_22
unknown

Not on your lists

comp(21910..22059)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_23
unknown

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comp(22056..22217)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_24
unknown

Not on your lists

comp(22214..22456)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_25
unknown

Not on your lists

comp(22471..22878)
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_26
unknown

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comp(22875..23327)
DNA (453bp) protein (151aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_27
unknown

Not on your lists

comp(23361..23747)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_28
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23752..24456)
DNA (705bp) protein (235aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
muramidase (phage lysozyme) (EC:3.2.1.17); K01185 lysozyme [EC:3.2.1.17]
Lysozyme n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MLD0_9BURK
SCNpilot_bf_inoc_scaffold_460_curated_29
unknown

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comp(24788..25357)
DNA (570bp) protein (190aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_460_curated_30
unknown

Not on your lists

comp(25354..25866)
DNA (513bp) protein (171aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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