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SCNpilot_bf_inoc_scaffold_442_curated

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Displaying items 31-60 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_442_curated_31
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26275..26913)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI0003661299
Pyridoxamine 5'-phosphate oxidase-like protein {ECO:0000313|EMBL:EIK91688.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein; K07006
SCNpilot_bf_inoc_scaffold_442_curated_32
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26988..28169)
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030C774D
acetyl-CoA acetyltransferase
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AFU47824.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_442_curated_33
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28218..30116)
DNA (1899bp) protein (633aa)
(isocitrate dehydrogenase (nadp(+))) kinase (EC:2.7.11.5); K00906 isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic
Isocitrate dehydrogenase kinase/phosphatase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TST8_ALIDB
SCNpilot_bf_inoc_scaffold_442_curated_34
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30121..30795)
DNA (675bp) protein (225aa)
carbonate dehydratase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VJF0_POLNA
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
SCNpilot_bf_inoc_scaffold_442_curated_35
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30863..32044)
DNA (1182bp) protein (394aa)
Isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:EIK91684.1}; EC=1.3.8.4 {ECO:0000313|EMBL:EIK91684.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
acyl-CoA dehydrogenase domain-containing protein; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
isovaleryl-CoA dehydrogenase n=1 Tax=Brachymonas chironomi RepID=UPI0003732EC5
SCNpilot_bf_inoc_scaffold_442_curated_36
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32070..32513)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3D5B7_9BURK
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_442_curated_37
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32554..33003)
DNA (450bp) protein (150aa)
Transcriptional regulator, MerR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW69_RAMTT
MerR family transcriptional regulator
Transcriptional regulator, MerR family-like protein {ECO:0000313|EMBL:AEG91639.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_442_curated_38
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33098..34177
DNA (1080bp) protein (360aa)
hypothetical protein id=5080400 bin=GWF1_Burkholderiales_GWF1_66_17 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_442_curated_39
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34371..35144
DNA (774bp) protein (258aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Comamonas testosteroni S44 RepID=D8D0Q0_COMTE
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KGH10993.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
short-chain dehydrogenase/reductase SDR
SCNpilot_bf_inoc_scaffold_442_curated_40
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35452..36363)
DNA (912bp) protein (304aa)
metal-dependent hydrolase n=1 Tax=Acidovorax radicis RepID=UPI000237630D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU44333.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_442_curated_41
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36385..37158)
DNA (774bp) protein (258aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC:2.3.1.51); K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Polaromonas sp. CF318 RepID=J3CS29_9BURK
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:BAO81679.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
SCNpilot_bf_inoc_scaffold_442_curated_42
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37216..37794)
DNA (579bp) protein (193aa)
histidinol-phosphate phosphatase family protein; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CM88_VARPS
Histidinol-phosphate phosphatase family protein {ECO:0000313|EMBL:ACS21347.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_bf_inoc_scaffold_442_curated_43
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37803..38426)
DNA (624bp) protein (208aa)
hypothetical protein id=12552835 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_442_curated_44
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38423..40597)
DNA (2175bp) protein (725aa)
glycine--tRNA ligase (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14] id=5080404 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
glyS; glycyl-tRNA ligase subunit beta (EC:6.1.1.14)
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_442_curated_45
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40612..41067)
DNA (456bp) protein (152aa)
Ribonuclease VapC n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NW57_9DELT
hypothetical protein; K07064
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_442_curated_46
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41080..41367)
DNA (288bp) protein (96aa)
MazE protein n=1 Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5AL05_BURRH
MazE protein; K07172 antitoxin
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_442_curated_47
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41449..42369)
DNA (921bp) protein (307aa)
glyQ; glycyl-tRNA ligase subunit alpha (EC:6.1.1.14) id=12549617 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glyQ; Glycine--tRNA ligase subunit alpha; K01878 glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_442_curated_48
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42474..43694)
DNA (1221bp) protein (407aa)
beta-ketoacyl synthase; K00647 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
Beta-ketoacyl synthase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXY9_ALIDB
Beta-ketoacyl synthase {ECO:0000313|EMBL:GAO26309.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_bf_inoc_scaffold_442_curated_49
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43691..44203)
DNA (513bp) protein (171aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|SAAS:SAAS00064166};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
3-hydroxydecanoyl-(acyl carrier protein) dehydratase (EC:4.2.1.60); K01716 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.60]
3-hydroxydecanoyl-ACP dehydratase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371BBE9
SCNpilot_bf_inoc_scaffold_442_curated_50
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44255..45862)
DNA (1608bp) protein (536aa)
lnt; apolipoprotein N-acyltransferase (ALP N-acyltransferase), membrane protein; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-]
Apolipoprotein N-acyltransferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW61_RAMTT
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_442_curated_51
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45862..46752)
DNA (891bp) protein (297aa)
cation transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035C6278
cbs domain containing protein; K06189 magnesium and cobalt transporter
CBS domain containing protein {ECO:0000313|EMBL:ADU39575.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
SCNpilot_bf_inoc_scaffold_442_curated_52
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46844..47548)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00036ECE5E
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_442_curated_53
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(47717..48193)
DNA (477bp) protein (159aa)
Transcriptional regulator, Lrp/AsnC family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW58_RAMTT
Lrp/AsnC family transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator, Lrp/AsnC family-like protein {ECO:0000313|EMBL:AEG91628.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_442_curated_54
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48397..49521
DNA (1125bp) protein (375aa)
4-hydroxyphenylpyruvate dioxygenase; K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
Candidate 4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XW57_RAMTT
Candidate 4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:AEG91627.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_442_curated_55
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49765..50694)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB8_ALIDB
hypothetical protein; K07027
Uncharacterized protein {ECO:0000313|EMBL:ADU98256.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_442_curated_56
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50700..51722)
DNA (1023bp) protein (341aa)
Glycosyl transferase family 2 n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB7_ALIDB
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADU98255.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_442_curated_57
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51793..53307
DNA (1515bp) protein (505aa)
Glycosyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB6_ALIDB
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:ADU98254.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_442_curated_58
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53351..54694
DNA (1344bp) protein (448aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22]
Nucleotide sugar dehydrogenase n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TWB4_ALIDB
UDP-glucose/GDP-mannose dehydrogenase protein {ECO:0000313|EMBL:GAO21451.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
SCNpilot_bf_inoc_scaffold_442_curated_59
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55573..56271
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3CSX2_9BURK
transmembrane lipoprotein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_bf_inoc_scaffold_442_curated_60
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56331..57095
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00035FD347
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EID56133.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
alpha/beta hydrolase
Displaying items 31-60 of 186 in total

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