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SCNpilot_bf_inoc_scaffold_442_curated

Search features with annotation key words

Displaying items 1-30 of 186 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_442_curated_1
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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151..420
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y2F6_RAMTT
hypothetical protein; K06940
Uncharacterized protein {ECO:0000313|EMBL:AEG91130.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_442_curated_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

530..1135
DNA (606bp) protein (202aa)
gst; glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain-containing protein id=1279022 bin=GWE1_Burkholderiales_65_30 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_442_curated_3
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1274..2587)
DNA (1314bp) protein (438aa)
Transporter n=1 Tax=Acidovorax sp. KKS102 RepID=K0HVF9_9BURK
transporter
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_442_curated_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2630..3757
DNA (1128bp) protein (376aa)
12-oxophytodienoate reductase (EC:1.3.1.42); K10680 N-ethylmaleimide reductase [EC:1.-.-.-]
NADH:flavin oxidoreductase/NADH oxidase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRC0_ALIDB
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ADU97831.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
SCNpilot_bf_inoc_scaffold_442_curated_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3771..4445)
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI0003955B1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFJ11662.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_bf_inoc_scaffold_442_curated_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4457..5266)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI000395AAFD
Uncharacterized protein {ECO:0000313|EMBL:KFJ09151.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_442_curated_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5263..5745)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Delftia RepID=A9BT51_DELAS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91698.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_bf_inoc_scaffold_442_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5742..6353)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Comamonas sp. B-9 RepID=UPI00039562C2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX34617.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
SCNpilot_bf_inoc_scaffold_442_curated_9
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6431..7039)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037BC303
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91696.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_bf_inoc_scaffold_442_curated_10
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7183..8184)
DNA (1002bp) protein (334aa)
Putative uncharacterized protein n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AQM7_DELSC
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEF91695.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_bf_inoc_scaffold_442_curated_11
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9590..9820)
DNA (231bp) protein (77aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB86393.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
SCNpilot_bf_inoc_scaffold_442_curated_12
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9935..10765)
DNA (831bp) protein (277aa)
fghA; S-formylglutathione hydrolase (EC:3.1.2.12); K01070 S-formylglutathione hydrolase [EC:3.1.2.12]
S-formylglutathione hydrolase n=1 Tax=Brachymonas chironomi RepID=UPI00037318FE
S-formylglutathione hydrolase protein {ECO:0000313|EMBL:ERK86632.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
SCNpilot_bf_inoc_scaffold_442_curated_13
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10782..11462)
DNA (681bp) protein (227aa)
nucleoside-diphosphate sugar epimerase n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F4FFBE
semialdehyde dehydrogenase NAD - binding protein
Semialdehyde dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ADV28573.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;"
SCNpilot_bf_inoc_scaffold_442_curated_14
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11459..12571)
DNA (1113bp) protein (371aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
S-(hydroxymethyl)glutathione dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000375A47A
s-(hydroxymethyl)glutathione dehydrogenase-like
SCNpilot_bf_inoc_scaffold_442_curated_15
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12724..13308)
DNA (585bp) protein (195aa)
Hemerythrin HHE cation binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222K5_RHOFD
hemerythrin HHE cation-binding protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_442_curated_16
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13625..15856)
DNA (2232bp) protein (744aa)
heavy metal translocating p-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Heavy metal translocating P-type ATPase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9M9V5_ACIET
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_442_curated_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16013..16213
DNA (201bp) protein (67aa)
Heavy metal transport/detoxification protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV0_9BURK
heavy metal transport/detoxification protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_442_curated_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16280..16636
DNA (357bp) protein (119aa)
Transcriptional regulator, MerR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVZ4_VARPS
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACS16692.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_bf_inoc_scaffold_442_curated_19
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16800..17327
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X3Z3_VARPD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_442_curated_20
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18081..18374
DNA (294bp) protein (98aa)
Integral membrane protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VL42_POLNA
integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CDS53921.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
SCNpilot_bf_inoc_scaffold_442_curated_21
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18374..18583
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI00030D933A
Uncharacterized protein {ECO:0000313|EMBL:CDS53922.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_442_curated_22
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18570..20300)
DNA (1731bp) protein (577aa)
Putative glycosyl transferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UGS0_MYXSD
putative glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:AGC45644.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
SCNpilot_bf_inoc_scaffold_442_curated_23
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20772..21515
DNA (744bp) protein (248aa)
Probable septum site-determining protein MinC id=1279035 bin=GWE1_Burkholderiales_65_30 species=Ramlibacter tataouinensis genus=Ramlibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
minC; septum formation inhibitor; K03610 septum site-determining protein MinC
Tax=BJP_08E140C01_Burkholderiales_65_30
SCNpilot_bf_inoc_scaffold_442_curated_24
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21722..22537
DNA (816bp) protein (272aa)
Site-determining protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TIE9_ACIAC
septum site-determining protein MinD; K03609 septum site-determining protein MinD
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
SCNpilot_bf_inoc_scaffold_442_curated_25
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22542..22808
DNA (267bp) protein (89aa)
Cell division topological specificity factor n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCJ1_9BURK
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
cell division topological specificity factor MinE
SCNpilot_bf_inoc_scaffold_442_curated_26
unknown

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22970..23704
DNA (735bp) protein (245aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_442_curated_27
unknown

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comp(23841..24152)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_442_curated_28
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24682..24951
DNA (270bp) protein (90aa)
Translation initiation factor IF-1 n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MUV6_9BURK
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
translation initiation factor if-1; K02518 translation initiation factor IF-1
SCNpilot_bf_inoc_scaffold_442_curated_29
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24998..25564
DNA (567bp) protein (189aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:CCH80269.1}; EC=2.1.1.77 {ECO:0000313|EMBL:CCH80269.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
protein-L-isoaspartate(D-aspartate)O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Protein-L-isoaspartate(D-aspartate) n=1 Tax=Nocardioides sp. CF8 RepID=R7XSX2_9ACTO
SCNpilot_bf_inoc_scaffold_442_curated_30
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25593..26267)
DNA (675bp) protein (225aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q124G4_POLSJ
short chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABE46078.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Displaying items 1-30 of 186 in total

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