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SCNpilot_bf_inoc_scaffold_442_curated_18

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 16280..16636

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, MerR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVZ4_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 112.0
  • Bit_score: 174
  • Evalue 7.60e-41
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 112.0
  • Bit_score: 174
  • Evalue 2.40e-41
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ACS16692.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 112.0
  • Bit_score: 174
  • Evalue 1.10e-40

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGGTGCGCCACTACGAATCGCTCGGCCTGCTGGGCGAGGTGGCGCGCACCGACAGCGGCTACCGCCAGTACCGCGCGGCCGACGTGCACACGCTGCGCTTCATCCGCCGCGCGCGCGAGCTGGGCTTTTCGATGACCGAGATCGCCGAGCTGGTCAGCCTGTGGCACGACCGCGGCCGCGCCAGCGCCGACGTCAAGCGCATCGCCCAGCGCCACCTGGCCGAGCTGGAGCAGCGCATCGTCGCCCTGCAGGACATGCGCCGCACGCTGGACGATCTGCTGTGCCACTGCCACGGCGACGCGCGGCCCGACTGCCCGATCCTGGACGAGCTGGCCGCCGGCAGCGCACCCGCCTGA
PROTEIN sequence
Length: 119
MVRHYESLGLLGEVARTDSGYRQYRAADVHTLRFIRRARELGFSMTEIAELVSLWHDRGRASADVKRIAQRHLAELEQRIVALQDMRRTLDDLLCHCHGDARPDCPILDELAAGSAPA*