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SCNpilot_bf_inoc_scaffold_1246_curated_23

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(20930..21589)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y8E0_LEPCP similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 222.0
  • Bit_score: 252
  • Evalue 3.10e-64
two component LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.4
  • Coverage: 222.0
  • Bit_score: 252
  • Evalue 9.80e-65
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 221.0
  • Bit_score: 256
  • Evalue 3.00e-65

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Taxonomy

R_Burkholderiales_63_240 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGAAAGCTGTGCTTGTCGTCGAGGACCTGCCGGACATCCGTGCCTGGCTGGTCGAGACCGCCCATATCGCGTTTCCTGGCACCGAGGTGGTGGCGGCGGGTCGCTGTCGCGAGGGCATCGACGCGCTGGCGCGGCAGGCGTTCGACGTCGTGCTGGTCGATCTCGAACTGCCCGATGGCAGCGGGGTGTCGGTGATCCGCGCGCTGCGCCAGCAGCAGCCGGCCGCGGTGCCGGTGGTGGTCACCATCCACGACGACGACGAGCACCTGTTCCCCGCGCTGCAGGCCGGCGCCTTCGGCTATCTGCTGAAGGAATCACCGCGTCAGGACCTGGTGACCCAGCTGCGGCGCATTGCCGACGGCGAGCCGCCGCTGTCGCCGCCGATCGCGCGCCGCATCCTGGCCTACTTCAGCCATGGCGGCCCGCGCGTGGTCGACGTCACCCGCTTCGACCCCCACGAGGCGGTGCTGAACGCCCGCGAAACCGACATCCTGCAGCGCGTCGCCAAGGGCTACACCCTGCCCGAGATCGCCGGTCAGCTGCATCTGTCGCGCCACACGGTGGCCGACTACGTCAAGCAGATTTACCGCAAGCTCAACGTCTCCTCGCGCGCCGAGGCGGCGCTGGAGGCGGCGCGCCGCGGGCTGGTGCGGCCCTGA
PROTEIN sequence
Length: 220
MKAVLVVEDLPDIRAWLVETAHIAFPGTEVVAAGRCREGIDALARQAFDVVLVDLELPDGSGVSVIRALRQQQPAAVPVVVTIHDDDEHLFPALQAGAFGYLLKESPRQDLVTQLRRIADGEPPLSPPIARRILAYFSHGGPRVVDVTRFDPHEAVLNARETDILQRVAKGYTLPEIAGQLHLSRHTVADYVKQIYRKLNVSSRAEAALEAARRGLVRP*