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SCNpilot_bf_inoc_scaffold_797_curated_15

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(9754..10692)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF09_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 82.7
  • Coverage: 306.0
  • Bit_score: 500
  • Evalue 1.60e-138
RNA polymerase sigma-32 subunit RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 306.0
  • Bit_score: 500
  • Evalue 5.00e-139
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; Flags: Precursor;; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.7
  • Coverage: 306.0
  • Bit_score: 500
  • Evalue 2.20e-138

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Taxonomy

Acidovorax ebreus → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGACCGAGAAGGCTCCCCGCACCAGCAACAACGCCGTGGCACTGTCCAATCCGTGGGCGGTGGTGCCGCCGCTGGGCAATCTGGACGCCTACATCAGCGCGGTCAATCGCCTGCCCATGCTGACGCTGGAGGAGGAGCAGCGCTACGCCCGCGAGCTGCGCGACACCGACAGCCTGGACGCCGCCGGCCGGCTGGTGCTGTCGCACCTGCGGCTGGTGGTGGCCACCTCGCGCCAGTACCTGGGCTACGGCCTGCCGCATGCCGACCTGATCCAGGAAGGCAACGTGGGCCTGATGAAGGCGGTCAAGCGCTTCGATCCGGACCAGGGCGTGCGGCTGGTGAGCTACGCGCTGCACTGGATCAAGGCCGAGATCCACGAATACATCCTCAAGAACTGGCGCCTGGTCAAGGTGGCCACGACCAAGGCGCAGCGCAAGCTGTTCTTCAACCTGCGCTCGATGAAGCAGGGCTTCAAGGCCGAGCTGGACGCCGACCTGGCGCACCGCGACGCGCTGACCGAGGAGCAGATCGACGTCGTGGCGCGCGAGCTGCAGGTCAAGCCGGCCGAGGTGCGCGAGATGGAAACGCGCCTGTCCGGCGGCGACGTGCTGCTCGACCCGGCGCCGTCCGACGACGGCGAGCAGGCGTTTGGCCCCATCGCCTACCTGTCGGACGAGCGCCACGAGCCGACGGCCATGATCGAGTCGGCCCAGCGCGACGCGCTGGCCACCGAAGGCATCGCCAGCGCGCTGCGCGGCCTGGACGAGCGCAGCCGCCGCATCGTCACCGAGCGCTGGCTGAACGTGAACGACGACGGCAGCGGCGGCATGACGCTGCACGAGCTGGCGGCCGAGTACGGCGTCAGCGCCGAACGCATCCGCCAGATCGAGGTGGCGGCGATGAAGAAGATGCGCGGCGCGCTGGCCGAATACGCCTGA
PROTEIN sequence
Length: 313
MTEKAPRTSNNAVALSNPWAVVPPLGNLDAYISAVNRLPMLTLEEEQRYARELRDTDSLDAAGRLVLSHLRLVVATSRQYLGYGLPHADLIQEGNVGLMKAVKRFDPDQGVRLVSYALHWIKAEIHEYILKNWRLVKVATTKAQRKLFFNLRSMKQGFKAELDADLAHRDALTEEQIDVVARELQVKPAEVREMETRLSGGDVLLDPAPSDDGEQAFGPIAYLSDERHEPTAMIESAQRDALATEGIASALRGLDERSRRIVTERWLNVNDDGSGGMTLHELAAEYGVSAERIRQIEVAAMKKMRGALAEYA*