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SCNpilot_bf_inoc_scaffold_2341_curated_12

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(8412..8936)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 factor-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0I9_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 187.0
  • Bit_score: 257
  • Evalue 1.00e-65
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 187.0
  • Bit_score: 257
  • Evalue 3.20e-66
RNA polymerase sigma-24 factor-like protein {ECO:0000313|EMBL:AEG93395.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 187.0
  • Bit_score: 257
  • Evalue 1.40e-65

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Taxonomy

Ramlibacter tataouinensis → Ramlibacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
TTGGCCACCGATCAGGAACTCTCCGACTTTCTGCGCAACGTCGAAAAGCGGGCGTTCAANNNNNNNNNNNNNNNNNNNNTGAAGCTGGCCGAGCATTACGGTGGCAAGCCGGCGGCCGAATTGCCGCTGCTGTTCCAGCGCATCCTGTCCAACAGCACGCTGGACTGGTTTCGGCGGCAGAAGACGCGCAACGCGCTATTTTCCAACCTGAGCGACTTTGAAGCCGAGGACGGCGAGGGCGAATTCGACCTGCTGGAGATCTTCGCCGGCGCCAACGACAGCGCCCAGATCGAGAGCGCGGAGGACTCCACCCGGCGCGCCCAGGTGCTGCGCGAGATCGAGTTACAAATCCAGGCCCTGCCCAACCGTCAACGCGAGGCGTTTCTGCTGCGTTACTGGGAGGAAATGGATGTTGCCGAAACGGCGGCGGTCATGGGGTGTTCGGAAGGCAGTGTCAAGACGCACTGTTCGCGCGCAGTCCAGGCGCTGGCGAAGGCCTTGAGAGCCAAAGGAATCCAGCCATGA
PROTEIN sequence
Length: 175
LATDQELSDFLRNVEKRAFXXXXXXXXKLAEHYGGKPAAELPLLFQRILSNSTLDWFRRQKTRNALFSNLSDFEAEDGEGEFDLLEIFAGANDSAQIESAEDSTRRAQVLREIELQIQALPNRQREAFLLRYWEEMDVAETAAVMGCSEGSVKTHCSRAVQALAKALRAKGIQP*