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SCNpilot_bf_inoc_scaffold_2341_curated

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_2341_curated_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69..479)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RK59_COMTE
Putative uncharacterized protein {ECO:0000313|EMBL:EHN67361.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_2341_curated_2
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1016..2023
DNA (1008bp) protein (336aa)
serine/threonine-protein kinase; K00924 [EC:2.7.1.-]
Serine/threonine protein kinase n=1 Tax=Polaromonas sp. CF318 RepID=J3CS28_9BURK
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_2341_curated_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2036..2944
DNA (909bp) protein (303aa)
Serine/threonine protein phosphatase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XYN8_RAMTT
serine/threonine protein phosphatase
Serine/threonine protein phosphatase-like protein {ECO:0000313|EMBL:AEG94405.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_2341_curated_4
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3000..3737
DNA (738bp) protein (246aa)
ribonuclease PH n=1 Tax=Curvibacter lanceolatus RepID=UPI00037E9C13
ribonuclease ph
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_2341_curated_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3781..4380
DNA (600bp) protein (200aa)
nucleoside-triphosphate diphosphatase n=1 Tax=Acidovorax avenae RepID=UPI00031C964C
dITP/XTP pyrophosphatase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_2341_curated_6
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4377..5576
DNA (1200bp) protein (400aa)
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EIK88878.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EIK88878.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MI38_9BURK
oxygen-independent coproporphyrinogen III oxidase
SCNpilot_bf_inoc_scaffold_2341_curated_7
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5573..6175)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VMZ6_POLNA
hypothetical protein; K06966
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
SCNpilot_bf_inoc_scaffold_2341_curated_8
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6172..6585)
DNA (414bp) protein (138aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
Diacylglycerol kinase n=2 Tax=Delftia acidovorans RepID=S2WKC6_DELAC
Prokaryotic diacylglycerol kinase family protein {ECO:0000313|EMBL:KFJ12537.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans) (Comamonas acidovorans).;"
SCNpilot_bf_inoc_scaffold_2341_curated_9
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6618..7220)
DNA (603bp) protein (201aa)
RDD domain containing protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6S8_ACISJ
RDD domain-containing protein
RDD domain containing protein {ECO:0000313|EMBL:ABM41953.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_bf_inoc_scaffold_2341_curated_10
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7296..7916)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0J1_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93397.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_2341_curated_11
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7948..8415)
DNA (468bp) protein (156aa)
Putative transmembrane protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12B54_POLSJ
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_2341_curated_12
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8412..8936)
DNA (525bp) protein (175aa)
RNA polymerase sigma-24 factor-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0I9_RAMTT
RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase sigma-24 factor-like protein {ECO:0000313|EMBL:AEG93395.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_2341_curated_13
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9247..11049
DNA (1803bp) protein (601aa)
ilvI2; acetolactate synthase, large subunit IlvL (EC:2.2.1.6)
Acetolactate synthase, large subunit IlvL n=1 Tax=Variovorax paradoxus B4 RepID=T1X9L6_VARPD
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_2341_curated_14
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11226..11717
DNA (492bp) protein (164aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase 3 regulatory subunit n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKC4_9BURK
Acetolactate synthase {ECO:0000313|EMBL:EYC51980.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
SCNpilot_bf_inoc_scaffold_2341_curated_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11794..12810
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86); K00053 ketol-acid reductoisomerase [EC:1.1.1.86]
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 /
Ketol-acid reductoisomerase n=2 Tax=Alicycliphilus denitrificans RepID=E8TWJ1_ALIDB
SCNpilot_bf_inoc_scaffold_2341_curated_16
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12971..13849
DNA (879bp) protein (293aa)
multidrug resistance protein; K00998 phosphatidylserine synthase [EC:2.7.8.8]
Multidrug resistance protein n=4 Tax=Comamonas testosteroni RepID=D0J5D4_COMT2
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:KGH27806.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
SCNpilot_bf_inoc_scaffold_2341_curated_17
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14079..15617
DNA (1539bp) protein (513aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037991F4
SCNpilot_bf_inoc_scaffold_2341_curated_18
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15738..16973
DNA (1236bp) protein (412aa)
peptidase S11, D-alanyl-D-alanine; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D-alanyl-D-alanine endopeptidase n=1 Tax=Comamonas testosteroni S44 RepID=D8D6T0_COMTE
D-alanyl-D-alanine endopeptidase {ECO:0000313|EMBL:EFI61288.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
SCNpilot_bf_inoc_scaffold_2341_curated_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17053..17835)
DNA (783bp) protein (261aa)
IclR family transcriptional regulator id=12550251 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
transcriptional regulator, IclR family
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
SCNpilot_bf_inoc_scaffold_2341_curated_20
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17848..18594)
DNA (747bp) protein (249aa)
arginyl-tRNA-protein transferase; K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Putative arginyl-tRNA--protein transferase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y0I0_RAMTT
SCNpilot_bf_inoc_scaffold_2341_curated_21
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18591..19358)
DNA (768bp) protein (256aa)
Leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G4W6_ALIDK
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_2341_curated_22
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19358..19903)
DNA (546bp) protein (182aa)
NUDIX hydrolase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W7N0_ACISJ
nudix hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACM33134.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_2341_curated_23
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19961..20407
DNA (447bp) protein (149aa)
Transcriptional regulator, MarR family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWD2_RAMTT
MarR family transcriptional regulator
Transcriptional regulator, MarR family-like protein {ECO:0000313|EMBL:AEG92886.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_2341_curated_24
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20609..21334
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWD3_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92887.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_2341_curated_25
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21383..22021
DNA (639bp) protein (213aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
Candidate maleylacetoacetate isomerase n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWE3_RAMTT
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_bf_inoc_scaffold_2341_curated_26
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22021..22848
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12BM8_POLSJ
hypothetical protein; K05810 conserved hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_bf_inoc_scaffold_2341_curated_27
RIFOXYC2_FULL_Burkholderiales_59_8_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(22903..23694)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00036C9878
Tax=RIFOXYC2_FULL_Burkholderiales_59_8_curated
SCNpilot_bf_inoc_scaffold_2341_curated_28
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23929..24723
DNA (795bp) protein (265aa)
poly(R)-hydroxyalkanoic acid synthase, class I; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002FBFA34
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
SCNpilot_bf_inoc_scaffold_2341_curated_29
unknown

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24805..25722
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_bf_inoc_scaffold_2341_curated_30
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26202..27383
DNA (1182bp) protein (394aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371AD4A
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:GAD24119.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Displaying items 1-30 of 40 in total

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