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SCNpilot_bf_inoc_scaffold_763_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(6806..7309)

Top 3 Functional Annotations

Value Algorithm Source
Putative transmembrane protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJV3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 160.0
  • Bit_score: 161
  • Evalue 7.20e-37
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 160.0
  • Bit_score: 161
  • Evalue 2.30e-37
Putative transmembrane protein {ECO:0000313|EMBL:ACS21004.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 160.0
  • Bit_score: 161
  • Evalue 1.00e-36

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
TTGCAGCAAACGTCGACTTACCGGTGGGCTCGCGTCAGCGACCAGGCGCTGGCCTGGCACCTGCGGCGCAACTGCAGCGTCACGCCGCGCCAGCTGGGCGGGTGGTACGCGACGCTGTGCCTGCTGTCGCTGCTCATTGGCAGCGGTTTCTGGGTGCTCGGCATGCCCCTGGTGCTGGCGTTCGCCGGCCTGGAGCTGCTGGCGGTGGGCGTCGCGCTGCTGGTCTATGCGCGGCACGCGCTCGATGGTGAGACGGTGCGGCTGCAAGGCGGGCGCCTGAGTGTCGAGCGCGAGTGCGCCGGTCGCCGGGAAACGCTGGAATTCGGCGGCGCGCCGCGGGTGCGCATCCGCACGCTGGCGCACGAGCAGGACTTGATCGAGCTCCAGGCGCCCGGGCGGCGGCTCAGCGTCGGCCGCCATGTGCGGCCGCAGTGGCGCTGCGCGCTGGCCGGCGAAATGCGCAGGGCGTTGCAGGCCGGTGACCTGCACGGACAGGGAATTTGA
PROTEIN sequence
Length: 168
LQQTSTYRWARVSDQALAWHLRRNCSVTPRQLGGWYATLCLLSLLIGSGFWVLGMPLVLAFAGLELLAVGVALLVYARHALDGETVRLQGGRLSVERECAGRRETLEFGGAPRVRIRTLAHEQDLIELQAPGRRLSVGRHVRPQWRCALAGEMRRALQAGDLHGQGI*