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SCNpilot_bf_inoc_scaffold_3089_curated_1

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1..369

Top 3 Functional Annotations

Value Algorithm Source
lysS; lysine--tRNA ligase LysS (EC:6.1.1.6) similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 122.0
  • Bit_score: 226
  • Evalue 4.20e-57
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 122.0
  • Bit_score: 226
  • Evalue 1.90e-56
Lysine--tRNA ligase n=1 Tax=Variovorax paradoxus (strain S110) RepID=SYK_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 122.0
  • Bit_score: 226
  • Evalue 1.30e-56

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
CTGTGGCAGCCCACCTTCATCATGGAGCACCCGACCGAGATCAGCCCGCTGGCGCGCGCCAACGACCAGCGGCCCGAGGTGACCGAGCGCTTCGAGCTCTACATCACCGGCCGCGAGATGGCCAACGGCTTTTCCGAGCTGAACGACGCCGAGGACCAGGCCGCGCGCTTTGCCGCCCAGGCCAGCGCCAAGGACGCGGGCGACGAAGAGGCCATGTTCTATGACCAGGACTTCATCCGCGCGCTGGAATACGGCATGCCGCCCACCGGCGGCTGCGGCGTCGGCATCGACCGCTTCATGATGCTGCTGACCGACAGCCAGAGCATCCGCGACGTGATCCTGTTTCCGGCGCTGCGGCACGAGACCTGA
PROTEIN sequence
Length: 123
LWQPTFIMEHPTEISPLARANDQRPEVTERFELYITGREMANGFSELNDAEDQAARFAAQASAKDAGDEEAMFYDQDFIRALEYGMPPTGGCGVGIDRFMMLLTDSQSIRDVILFPALRHET*