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SCNpilot_bf_inoc_scaffold_601_curated_47

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(48137..49072)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003643DBF similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 302.0
  • Bit_score: 304
  • Evalue 1.70e-79
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 298.0
  • Bit_score: 304
  • Evalue 5.30e-80
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS21533.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 298.0
  • Bit_score: 304
  • Evalue 2.30e-79

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGGATACCCTGGAGCTCTTGCGCACGTTTCGCGAGGTGGCTCGACGCCACAGCTTCTCGGCGGCGGCTCGCACCCTAGATCTGGCACCCGCCACGGTGAGCAAGTACGTGGCCGAGCTGGAGACACGCTTTCACCTTCGTCTGTTCAACCGCAGCACGCGCCGGGTGTCGCTGACCGACGCCGGCCAGCTGCTGCTGGAGCACAGCGGGCGGGTGGTCGACCTGATCGACCAGACCGAGGACGCCATGAACGACCGTGCCCACCGACCCGGCGGGTGGCTGAACCTGGCCGCGCCGCACGGGCTGACGCGCACGGTGCTGGTGCGCCGACTGGCCGACTTCATGCTGCGCCACCCCGACGTCTCGGTCCATCTGCACCTGACCAACCGGCTGGTCGATCTGGCCGAGGACGGCATTGACGTCGCCTTCCGCATCGGCGCGGTGGCCGACAGCAGACTGATCGTGCGCCGCCTGCAGCAGATCGAAATGGTGGTGGCCGCCACCCCGGGGTACTGGCACGCGCATGGCCGCCCCGATCACCCGCGAGAACTGTCCACCCATCGCACGCTGGCCATGGCGCCGCCGGGCGAGACGCCCCACTGGCAATTCAACGTCGGGGGCAAGCTGCTCGACCTGCCCTTGCGGGCGGTCTTCACCGCCACCGACTTCTCGCCCCTGGTGCCGCTGGCGCTCAAGGGTGTCGGCGTGGTGCGCGGCTCACGGATGCTGATGGGTGACTGGATCGAGGCCGGAAAGCTGGAGCCGCTGTTTGCCCAGTATTCGCCCCGCAACCTGTGGCTCTACGCCGCCTACGCCCAGCGCCGCAACCCCAGCGCCGCATTGCGCGCGCTGCTGGATTTTCTGGAAGAGCAGCGGCGCCAGCCACCCTCCGGCGACGCGGAAGAACCTCCCGGCGCGGCGCGCCTAGACACATGA
PROTEIN sequence
Length: 312
MDTLELLRTFREVARRHSFSAAARTLDLAPATVSKYVAELETRFHLRLFNRSTRRVSLTDAGQLLLEHSGRVVDLIDQTEDAMNDRAHRPGGWLNLAAPHGLTRTVLVRRLADFMLRHPDVSVHLHLTNRLVDLAEDGIDVAFRIGAVADSRLIVRRLQQIEMVVAATPGYWHAHGRPDHPRELSTHRTLAMAPPGETPHWQFNVGGKLLDLPLRAVFTATDFSPLVPLALKGVGVVRGSRMLMGDWIEAGKLEPLFAQYSPRNLWLYAAYAQRRNPSAALRALLDFLEEQRRQPPSGDAEEPPGAARLDT*