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SCNpilot_bf_inoc_scaffold_1626_curated_22

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 22635..24050

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen metabolism transcriptional regulator NtrC n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP44_RUBGI similarity UNIREF
DB: UNIREF100
  • Identity: 69.9
  • Coverage: 492.0
  • Bit_score: 656
  • Evalue 1.50e-185
ntrC; nitrogen metabolism transcriptional regulator NtrC; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 492.0
  • Bit_score: 656
  • Evalue 4.80e-186
Nitrogen metabolism transcriptional regulator NtrC {ECO:0000313|EMBL:BAL94781.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 492.0
  • Bit_score: 656
  • Evalue 2.20e-185

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Taxonomy

Rubrivivax gelatinosus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAAACCGGTCTGGATCGTCGATGACGACCCCTCCATCCGCTTCGTGCTGGAACGCGCGCTGGCTCGCGCGCAGCTGCCAGTGCGCGCGTTTGCCGGCCCGCACGAGGTCATCGCCGCCCTCGACGCGGGCGCGCAGCCCCAGGTGCTGGTCACCGACATCCGCATGCCGCAGGGCAGCGGCATCGCGCTGCTGGCCGACGTCAAGCGCCGCCTGCCCGGCGTGCCGGTGATCATCATGACCGCCCACACCGACCTCGACAGCGCGGTCGGCGCGTTCCAGGGCGGCGCGTTCGAATACCTGCCCAAGCCCTTCGACGTGGAAAAGGCGGTCGAGCTGATCCGCCGCGCCGCCAGCGAGAGCCTGCGCGAGGAAGGTGCCGCCACCGAGGCCAGCGACTGGCCACGCATGCTGGGCCAGGCGCCGGCCATGCAGGAAGTGTTCCGCGCCATCGGCCGGCTCAGCCAGAGCGATGCCACGGTGCTGATCACCGGCGCTAGCGGTACCGGCAAGGAGCTGGTGGCGCACGCCCTGCATCGCCACAGCCCGCGCGCCGACGGCCCCTTTGTCGCCATCAACGCGGCCGCCATACCCAAAGACCTGCTGGAAAGCGAGCTGTTCGGCCACGAGCGCGGCGCCTTCACCGGCGCTCAGGCGATGCGGCGTGGCCGCTTCGAGCAGGCGGCCGGCGGCACCCTGTTCCTGGACGAGATCGGCGACATGCCGCTCGAGCTGCAAACCCGGCTGCTGCGCGTGCTCAGCGACGGACATTTCTATCGCGTCGGCGGCCACCAGCCGCAACGCGCCGAAGCCCGCGTAATCGCCGCCACGCACCAGAACCTGGCGGAGCACGTGCGGCAGGGCACGTTCCGCGAAGACCTGTACCACCGCCTGAACGTGATCCGCCTGCACCTGCCGCCGCTGCGCGAGCGGCGCGAGGACATCCCGCTGCTGACGCGCTTTTTTCTTGCCCGCGGCGCCCGTGAACTGGGCGTCGAGCCCAAGCACATCAGCGACGCTGCGCTGGAGCGCCTCAGCCGGTTCGACTTTCCTGGCAACGTGCGCCAGTTGGAGAACCTGTGCCGCTGGCTGACGGTGATGGCGCCGGGGCAGCGCGTCGAGCTGGAAGACCTGCCGCCCGATGTGGCCGGCGCCGACGCCCATCCAGCCCGCAGCGCCACCGGCGACGCGGCGGCCGCCGTCGACTGGAGCGTCGCGCTGGGCCAGCAGGCCCGCGACTGGCTGCAAGCGGGCGACGCGCAGGTCTGGGAGCGCCTGGCCGGCCAGTTCGAAACCGTGCTGCTGCGCACGGCGCTGCAGCTGACGCAAGGACGCCGCGCCGAAGCGGCGCAGAAGCTGGGCATCGGGCGCAACACCCTCACCCGCAAAATCCAGGAGCTGGGTCTTGACGATTGA
PROTEIN sequence
Length: 472
MKPVWIVDDDPSIRFVLERALARAQLPVRAFAGPHEVIAALDAGAQPQVLVTDIRMPQGSGIALLADVKRRLPGVPVIIMTAHTDLDSAVGAFQGGAFEYLPKPFDVEKAVELIRRAASESLREEGAATEASDWPRMLGQAPAMQEVFRAIGRLSQSDATVLITGASGTGKELVAHALHRHSPRADGPFVAINAAAIPKDLLESELFGHERGAFTGAQAMRRGRFEQAAGGTLFLDEIGDMPLELQTRLLRVLSDGHFYRVGGHQPQRAEARVIAATHQNLAEHVRQGTFREDLYHRLNVIRLHLPPLRERREDIPLLTRFFLARGARELGVEPKHISDAALERLSRFDFPGNVRQLENLCRWLTVMAPGQRVELEDLPPDVAGADAHPARSATGDAAAAVDWSVALGQQARDWLQAGDAQVWERLAGQFETVLLRTALQLTQGRRAEAAQKLGIGRNTLTRKIQELGLDD*