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SCNpilot_bf_inoc_scaffold_1198_curated_9

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 9904..11331

Top 3 Functional Annotations

Value Algorithm Source
signal recognition particle protein Srp54 n=1 Tax=Variovorax paradoxus RepID=UPI00036346E1 similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 462.0
  • Bit_score: 782
  • Evalue 3.20e-223
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 462.0
  • Bit_score: 778
  • Evalue 1.10e-222
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 462.0
  • Bit_score: 778
  • Evalue 5.00e-222

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGCCACCGCCCTCACCGACAAGCTCTCCGGCCTGGTCAAGAAGATCAGCGGCCAGGCCCGCATCACCGAATCCAACGTGCAGGACATGCTGCGCGAGGTGCGCATGGCCCTGCTGGAGGCCGACGTGGCCCTGCCCGTGGTGCGCGACTTCATCGCCCGCGTCAAGGACAAGGCGCTGGGCCAGGAGGTGCTGGGCAGCCTGAAGCCCGGCCAGGCGCTGGTGGGCATCGTCAACCGCGAGCTGGCCGCCACCATGGGCGAGGGCGTGAGCGACCTCAACCTCGCCGCGCAACCCCCGGCGGTGATCCTGATGGCCGGCCTGCAGGGCGCGGGCAAGACCACCACCACCGCCAAGCTGGCGCGCCACCTGATCAGCAAACGCAAGAAGAAGGTGCTGACGGTGTCGGGTGACGTGTACCGCCCGGCGGCCATCGAGCAGCTCAAGACCGTGACGGCGCAGGCCGGGGCCGACTGGTTCCCCTCCAGCCCGGAGCAGAAGCCGGTGGACATCGCGCGCGCGGCGCTGACCCATGCCCGCACGCACTTCTACGACGTGCTGCTGGTCGACTCCGCCGGCCGCCTGGCGATCGACGAGGCGCTGATGGCCGAGATCCAGGCCCTGCACGCGGCGCTGAACCCGGTCGAGACCCTGTTCGTGGTCGATGCCATGCAGGGCCAGGACGCGGCCAACACCGCCAAGGCCTTCAAGGACGCGCTGCCGCTGACGGGCATCGTGCTGACCAAGATGGACGGCGACGCGCGCGGCGGCGCGGCGCTGTCGGTGCGGCAAATCACCGGCGCGCCGATCAAGTTTGCCGGCGTCAGCGAGAAGATCGACGGCCTGGAGGTGTTCGACGCCGAGCGCCACGCCGGCCGCATCCTGGGCATGGGCGACGTGCTGGCGCTGGTCGAGCAGGTCACCGCCAACGTCGACATCGAGGCCGCCAGGAAGCTGGCCGAGAAGGTCAAGAGCGGCAGCGGCTTCGATCTGCAGGATTTCCTGGGTCAGTTGCAGCAGATGAAGCAGATGGGCGGCCTGTCGAGCCTGATGGACAAGCTGCCGGCGCAGATGGCCGCCAAGGCCACCGATGCCGACCTGACGCGCGCCGAAAAGGACGTGCGCCGCAAGGAAGGCATCATCAACAGCATGACGCCGGCCGAGCGCCGCAAGCCCGAACTGCTCAAGGCCAGCCGCAAGCGCCGCATCGCCGCCGGCGCGGGCGTGCAGGTGCAGGAGGTCAACCGCCTGCTCAAGGAGTTCGAGCAGATGCAGGGCATGATGAAGCAGTTCAAAGGCGGCGCCCTGGCCAAGATGATGCGCCGCATGGGCGGCATGAAGGGCATGGGCGGGCTGCTGGGCGGTGGCGGCATGCCGCCGCTGCCGCCGGGCATGGGCGGGCCGGGCGGCGGCAAGCGGCCGTTTTGA
PROTEIN sequence
Length: 476
MATALTDKLSGLVKKISGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKDKALGQEVLGSLKPGQALVGIVNRELAATMGEGVSDLNLAAQPPAVILMAGLQGAGKTTTTAKLARHLISKRKKKVLTVSGDVYRPAAIEQLKTVTAQAGADWFPSSPEQKPVDIARAALTHARTHFYDVLLVDSAGRLAIDEALMAEIQALHAALNPVETLFVVDAMQGQDAANTAKAFKDALPLTGIVLTKMDGDARGGAALSVRQITGAPIKFAGVSEKIDGLEVFDAERHAGRILGMGDVLALVEQVTANVDIEAARKLAEKVKSGSGFDLQDFLGQLQQMKQMGGLSSLMDKLPAQMAAKATDADLTRAEKDVRRKEGIINSMTPAERRKPELLKASRKRRIAAGAGVQVQEVNRLLKEFEQMQGMMKQFKGGALAKMMRRMGGMKGMGGLLGGGGMPPLPPGMGGPGGGKRPF*