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SCNpilot_bf_inoc_scaffold_353_curated_11

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 10459..11082

Top 3 Functional Annotations

Value Algorithm Source
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRW2_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 207.0
  • Bit_score: 386
  • Evalue 1.70e-104
TRAP dicarboxylate transporter subunit DctP similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 207.0
  • Bit_score: 386
  • Evalue 5.40e-105
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ACS19913.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 207.0
  • Bit_score: 386
  • Evalue 2.40e-104

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGCTGGACGGTCCGATCGGCCAGGAGTTGCTGGCCAAGTTCGAGCCCAAGGGCTTCAAGGCGCTGGCCTGGGCCGAGAACGGCTTCCGCCACATGACCAACAGCAAGCGCGACGTCAAGGCGCCGGAGGACCTGAAGGGCCTGAAGATGCGCACCATGGAGAACCCGGTGCACGTGGCGGCCTACAAGGGCTTCGGCATCATCACCACGCCGATGGCCTTCCCCGAGGTGTTCACCGCGCTGCAGCAGGGCACGGTGGACGGTCAGGAAAACCCGCTGTCGGTCATCATCTCGGCTAAGTTCGACCAGGTGCAAAAGCACCTGACGCTGACTGGTCACGTGTATTCGCCGGCCATCTTCGTGATGAACAAGGGCGCCTTCGACAAGCTCAGCGCCGCCGACAAGCAGGCCTTCATCGACGCCGCCAGGGAAGGCACCAAGGCCAACCGCGCGCGCGTGGACGAGGACGATGCCAAGGGCGTGGCCGACCTGCGCGCCAAGGGCATGACGGTGATCGACACCATCGACAAGGCCAAGTTCGTTTCCGCCCTGGCGCCGGTCAACGCCCAGTTCGAGAAGGACTTCGGCAAGGCCAACCTCGACCGCATCCGCGACTACAAGTGA
PROTEIN sequence
Length: 208
VLDGPIGQELLAKFEPKGFKALAWAENGFRHMTNSKRDVKAPEDLKGLKMRTMENPVHVAAYKGFGIITTPMAFPEVFTALQQGTVDGQENPLSVIISAKFDQVQKHLTLTGHVYSPAIFVMNKGAFDKLSAADKQAFIDAAREGTKANRARVDEDDAKGVADLRAKGMTVIDTIDKAKFVSALAPVNAQFEKDFGKANLDRIRDYK*