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SCNpilot_bf_inoc_scaffold_353_curated

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_353_curated_1
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..410)
DNA (408bp) protein (136aa)
3-oxoacyl-[acyl-carrier-protein] reductase-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y499_RAMTT
3-oxoacyl-ACP reductase
3-oxoacyl-[acyl-carrier-protein] reductase-like protein {ECO:0000313|EMBL:AEG92564.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
SCNpilot_bf_inoc_scaffold_353_curated_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

571..2271
DNA (1701bp) protein (567aa)
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1P3_9BURK
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:EHL21415.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
electron-transferring-flavoprotein dehydrogenase
SCNpilot_bf_inoc_scaffold_353_curated_3
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2438..3409
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T327_ACIDE
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJA09131.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein; K01989 putative ABC transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_353_curated_4
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3507..4394
DNA (888bp) protein (296aa)
Inner-membrane translocator n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJ68_ACIET
inner-membrane translocator; K05832 putative ABC transport system permease protein
Inner-membrane translocator {ECO:0000313|EMBL:ACM33206.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
SCNpilot_bf_inoc_scaffold_353_curated_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4408..5202
DNA (795bp) protein (265aa)
ABC transporter related protein n=2 Tax=Acidovorax RepID=A1W7A2_ACISJ
ABC transporter-like protein; K05833 putative ABC transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ABM42127.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_bf_inoc_scaffold_353_curated_6
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5208..6011)
DNA (804bp) protein (268aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
hydroxypyruvate isomerase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BDDBA
hydroxypyruvate isomerase
SCNpilot_bf_inoc_scaffold_353_curated_7
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6022..6699)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HP75_RUBGI
putative aldolase class 2 protein HI_1012-like
Aldolase {ECO:0000313|EMBL:EXU79686.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
SCNpilot_bf_inoc_scaffold_353_curated_8
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6696..7973)
DNA (1278bp) protein (426aa)
HPr kinase n=1 Tax=Comamonas sp. B-9 RepID=UPI000395A904
HPr kinase {ECO:0000313|EMBL:EXU79687.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
type III effector Hrp-dependent outer protein
SCNpilot_bf_inoc_scaffold_353_curated_9
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7970..8878)
DNA (909bp) protein (303aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31); K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003957DBC
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EXU79688.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.;"
SCNpilot_bf_inoc_scaffold_353_curated_10
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9032..10060
DNA (1029bp) protein (343aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12CD7_POLSJ
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABE43805.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
SCNpilot_bf_inoc_scaffold_353_curated_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10459..11082
DNA (624bp) protein (208aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRW2_VARPS
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:ACS19913.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_bf_inoc_scaffold_353_curated_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11188..11682
DNA (495bp) protein (165aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CRW3_VARPS
tripartite ATP-independent periplasmic transporter DctQ component
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:ACS19914.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_bf_inoc_scaffold_353_curated_13
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12538..12897
DNA (360bp) protein (120aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000361529D
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EER61120.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_bf_inoc_scaffold_353_curated_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13137..14264
DNA (1128bp) protein (376aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
glycine cleavage system protein T; K00605 aminomethyltransferase [EC:2.1.2.10]
Aminomethyltransferase n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RUP7_COMTE
SCNpilot_bf_inoc_scaffold_353_curated_15
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14330..14698
DNA (369bp) protein (123aa)
Glycine cleavage system H protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VQQ8_POLNA
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272, ECO:0000313|EMBL:CDS54845.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
glycine cleavage system H protein; K02437 glycine cleavage system H protein
SCNpilot_bf_inoc_scaffold_353_curated_16
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14782..17655
DNA (2874bp) protein (958aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
glycine dehydrogenase (decarboxylating); K00281 glycine dehydrogenase [EC:1.4.4.2]
glycine dehydrogenase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003635D79
SCNpilot_bf_inoc_scaffold_353_curated_17
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17685..18668
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9F1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EEV88742.1}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobacterium hominis ATCC 15826.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_353_curated_18
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18697..19182
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI000300BF54
Acetyltransferase {ECO:0000313|EMBL:EGI78346.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
acetyltransferase
SCNpilot_bf_inoc_scaffold_353_curated_19
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19259..20131)
DNA (873bp) protein (291aa)
Transposase IS4 family protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6ZB14_9RHOO
Transposase IS4 family protein {ECO:0000313|EMBL:ENO89359.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
transposase IS4 family protein
SCNpilot_bf_inoc_scaffold_353_curated_20
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20380..20808)
DNA (429bp) protein (143aa)
Heat shock protein Hsp15 n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W6F6_ACISJ
RNA-binding S4 domain-containing protein; K04762 ribosome-associated heat shock protein Hsp15
Heat shock protein Hsp15 {ECO:0000313|EMBL:ABM41831.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
SCNpilot_bf_inoc_scaffold_353_curated_21
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20868..23420
DNA (2553bp) protein (851aa)
HAD superfamily P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000376F786
Uncharacterized protein {ECO:0000313|EMBL:KFN47019.1}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
SCNpilot_bf_inoc_scaffold_353_curated_22
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23464..24993
DNA (1530bp) protein (510aa)
Fis family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI00023762C4
pas modulated Fis family transcriptional regulator
Pas modulated Fis family transcriptional regulator {ECO:0000313|EMBL:AFU46977.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
SCNpilot_bf_inoc_scaffold_353_curated_23
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25126..25590
DNA (465bp) protein (155aa)
Extracellular ligand-binding receptor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BZP4_9BURK
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EHL22183.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
extracellular ligand-binding receptor
SCNpilot_bf_inoc_scaffold_353_curated_24
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25539..26240
DNA (702bp) protein (234aa)
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJI9_VARPS
ABC transporter permease {ECO:0000313|EMBL:KJA09383.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_bf_inoc_scaffold_353_curated_25
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26334..27092
DNA (759bp) protein (253aa)
ABC transporter related protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TAF6_ACIDE
ABC transporter related protein {ECO:0000313|EMBL:EER58545.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_bf_inoc_scaffold_353_curated_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27235..27960
DNA (726bp) protein (242aa)
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJJ3_VARPS
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein
Tax=GWA2_Curvibacter_64_110_curated
SCNpilot_bf_inoc_scaffold_353_curated_27
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28130..29113
DNA (984bp) protein (328aa)
Branched-chain amino acid transport system permease n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WBW9_DELAC
Branched-chain amino acid transport system permease {ECO:0000313|EMBL:EPD35690.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_bf_inoc_scaffold_353_curated_28
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29354..30427
DNA (1074bp) protein (358aa)
ABC transporter permease n=1 Tax=Chryseobacterium taeanense RepID=UPI0002EFEA13
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
SCNpilot_bf_inoc_scaffold_353_curated_29
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30462..32594
DNA (2133bp) protein (711aa)
D-(-)-3-hydroxybutyrate oligomer hydrolase {ECO:0000256|HAMAP-Rule:MF_01906}; Short=3HB-oligomer hydrolase {ECO:0000256|HAMAP-Rule:MF_01906};; Short=3HBOH {ECO:0000256|HAMAP-Rule:MF_01906};; EC=3.1.1.22 {ECO:0000256|HAMAP-Rule:MF_01906};; Flags: Precursor;; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
cytochrome C1 n=1 Tax=Acidovorax radicis RepID=UPI0002376622
D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane
SCNpilot_bf_inoc_scaffold_353_curated_30
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32597..33475
DNA (879bp) protein (293aa)
hydrolase n=1 Tax=Chryseobacterium taeanense RepID=UPI00036B86AC
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
Displaying items 1-30 of 67 in total

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