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SCNpilot_bf_inoc_scaffold_353_curated_24

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 25539..26240

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CJI9_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 233.0
  • Bit_score: 405
  • Evalue 3.10e-110
ABC transporter permease {ECO:0000313|EMBL:KJA09383.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 232.0
  • Bit_score: 411
  • Evalue 1.00e-111
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 233.0
  • Bit_score: 405
  • Evalue 9.60e-111

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GTGTCGGTGGCCACGCTGGCGCAGGACTACGCCTTTGGCCGCGACGGTGTGAAAGCCTTCAAGGACGCGCTGAAGAAGGCCAGGATCGTGCAGGAGGAATACCTGCCGCAGACCACCACCGACTTCACCGCCGGCATCCAGCGCGTGGTCGATGCCCTGAAGGACAAGCCGGGGCGCAAGGCGATCGAAGTCATCTGGGCGGGCGGCACGCCGCCCTTCAACGCGCTGGCGGCGCAGGACTTGAAGAAGCGCTTCGGCATCGAGGTCTTCACCGGCGGCAACATCCTGCCTGCCATGGCCAGCTACAAGAACTTCCCCGGCATGGAGGGGGCGACGTATTACTACTTCGGCATCCCGAAGAACCCGGTCAACGAAGCCCTGGTGGCCGCGCACTACAAGGAGTTCAAGACTCCGCCGGACTTCTTCACCGCGGGCGGCTTCTCGGCGGCGATGGCCATCGTCACGGCCCTCAAGGCCACGGGCGGCGACACCAACACCAACAAGCTCATCAAGACCATGGAGGGCATGAGCTTCGACACGCCCAAGGGCAAGATGACCTTCCGCAAGGAAGACCACCAGGCCATGCAAAGCATGTACCACTTCCGCATCAAGAACGACCCGGCCTTCGCCTGGGGCGTGCCCGAGCTGGTGCACGAGATCAAGCCCGAAGAGATGCAGGTGCCGATCCGGAATAAGCGCTGA
PROTEIN sequence
Length: 234
VSVATLAQDYAFGRDGVKAFKDALKKARIVQEEYLPQTTTDFTAGIQRVVDALKDKPGRKAIEVIWAGGTPPFNALAAQDLKKRFGIEVFTGGNILPAMASYKNFPGMEGATYYYFGIPKNPVNEALVAAHYKEFKTPPDFFTAGGFSAAMAIVTALKATGGDTNTNKLIKTMEGMSFDTPKGKMTFRKEDHQAMQSMYHFRIKNDPAFAWGVPELVHEIKPEEMQVPIRNKR*