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SCNpilot_bf_inoc_scaffold_353_curated_13

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 12538..12897

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000361529D similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 118.0
  • Bit_score: 211
  • Evalue 4.30e-52
TRAP dicarboxylate transporter subunit DctM similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 118.0
  • Bit_score: 211
  • Evalue 1.80e-52
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EER61120.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 118.0
  • Bit_score: 211
  • Evalue 8.00e-52

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Taxonomy

Acidovorax delafieldii → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
GTGCTCAAGAACCCCGCCATGTTCCTGCTGGGCGTGAACGCGGCGCTGTTCGTCATCGGCATGTTCATCGAGACCAGCGCCGCCATCATCGTGCTGGCGCCGATCCTGGCGCCGGTGGCGCAGCGCTTCGGCATCGACCCGGTGCACTTCGGACTGATCATGGTGGTCAACCTGGCGCTGGGCATGATCACGCCGCCCTTCGGCGTCAACCTGTTCGCGGCCTGCACCGTGGCGCGCGTGTCGCTGGACAAGATCATCCGCCACCTGGTGCCCTTCGTGGGCGTGGTGCTGGCTTGCCTGATGGTGATCACCTACGTGCCGGCGCTGTCGCTGGCGCTGCGCGATCTGGTCTACCGCTAG
PROTEIN sequence
Length: 120
VLKNPAMFLLGVNAALFVIGMFIETSAAIIVLAPILAPVAQRFGIDPVHFGLIMVVNLALGMITPPFGVNLFAACTVARVSLDKIIRHLVPFVGVVLACLMVITYVPALSLALRDLVYR*