ggKbase home page

SCNpilot_bf_inoc_scaffold_2085_curated_25

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22645..23244)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family id=1261993 bin=GWE1_Burkholderiales_65_30 species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 200.0
  • Bit_score: 211
  • Evalue 7.20e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 197.0
  • Bit_score: 209
  • Evalue 8.70e-52
Tax=BJP_08E140C01_Burkholderiales_65_30 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 200.0
  • Bit_score: 212
  • Evalue 6.00e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_08E140C01_Burkholderiales_65_30 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCCGAGCAGGCCGCCACGGCCGACGAAGCCCTCATGCGCGCCTATGCCGGCGGCGACACTCGTGAGTTTGAAACGCTGTACGACCGGCATGCCACGCGCGTCTGGCGCTACATTTTTCGCGGCACGCGCGACAATGCCACGGCCGACGAACTGGCGCAGGACGTGTGGCTGCGGGTGGCGCGCGCCGCGCCCGGCTACGCACCGAGCGCCGCCACGGCGCAGCGGCCGGTGGCGCGCTTCACCACCTGGCTGCTCACCCTCGCCCACCACCGGGTGGTCGATCACTTGCGCCAGCAGCGGCCCACGCAGAGCCTGGACGAGCCGCTGCACGACGAGCGCACGCTGGCCGACACGCTGGCCGCGCCCTCCGGCTTCGGTCCGCTGCGCCAGATCGAAAGCCGCCAGCAGGCCGCGCAGTTGCTGGCCGCGCTGGACGCGTTGCCGCCCGAGCAACGCCACGCCTTCCTGCTGCAGGCCGAGGGCGGGATGAGCGTGGCCGAAATCGCCGACGCCACCGGCGTCGGCCTGGAAACCGCCAAGAGCCGCCTGCGCTACGCCCGCACCGCGCTGCGCCGGGCGCTGGAGGACATCGCATGA
PROTEIN sequence
Length: 200
MSEQAATADEALMRAYAGGDTREFETLYDRHATRVWRYIFRGTRDNATADELAQDVWLRVARAAPGYAPSAATAQRPVARFTTWLLTLAHHRVVDHLRQQRPTQSLDEPLHDERTLADTLAAPSGFGPLRQIESRQQAAQLLAALDALPPEQRHAFLLQAEGGMSVAEIADATGVGLETAKSRLRYARTALRRALEDIA*