ggKbase home page

SCNpilot_bf_inoc_scaffold_1403_curated_11

Organism: scnpilot_dereplicated_Burkholderiales_2

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 13080..14408

Top 3 Functional Annotations

Value Algorithm Source
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 439.0
  • Bit_score: 514
  • Evalue 2.80e-143
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 439.0
  • Bit_score: 514
  • Evalue 1.20e-142
16S rRNA methyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI0003799FD4 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 444.0
  • Bit_score: 516
  • Evalue 3.00e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1329
ATGGCCGCATCGCCCGGCCAGGCCTTGCCGCTGTGGCGTCAGCTGCAGGCGACGGCGCGGCTGGTCGCTGCCGTGGAAGCCGGCCGCTCGCTGTCGGCCGAGCTGGCCCAGGTCGACGCGCCACTGCGCCCCGGCGCGCAGGCACTGTCGTTTCATGCGCTGCGCTGGCTGGGGCTGGCGCGGGCATTGCGCGCGCGCCTGGCGCGGCGCGCGCCGCCGCCGGCCGTCGATGCGCTGTTGTGCACCAGTCTGGCGCTGGCACAGCCGGCCGATGGGGCGCCGTACGAAGCTTTCACCCTGGTCGACCAGGCGGTCGAGGCCGCCAAGCGCGACCGCGTGCTGCGTCCGCACGCCGCGTTCATCAACGCCTGTCTGCGGCGCTTTCTGCGCGAGCGGGCCGCGCTGACGGCCGCCGTGCTGCACGATCCGGCGGCACGCTGGAACCACCCACGCTGGTGGGTCGAGCGGCTGCGCCGCGACCACCCCGAGCACTGGCAGGCCATTCTGTCGGCGGCCCAGCACGCGGCGCCGATGGATCTGCGCGTCAACCCGCGGCGGGCCAGCGTGGCCGACGTGTGCGCCCGCCTGGCGCAGCAGGGCGCGGGTGTTCGGGCGCTCGGTGGCGCGGCGCTGCGGCTTGAGCGGCCGCGCGCGGTGCAGGACCTTCCCGGCTTCGCGGCCGGCGAGCTGTCGGTGCAGTCGGCCACTGCCCAGCGCGCCGCGCCCCTGCTGCTCGAAGGTTGCGCCGACGTCGCCGCGCCTCGCGTGCTGGACGCCTGCGCCGCACCCGGGGGCAAGACCGCGCACTTGCTGGAGCTGCGCGCCGACGCCCGTGTCACCGCGCTGGAGATCGACCCGGCGCGCAGCGCGCGCATTGGTGAAACCCTGGCGCGCCTGGGTCTGCACGCCGACGTGCGCGTGGCCGACGCCGCCGACGTGCCGTCCTGGTGGCAGGGCGAGCGCTACGACGCCATCCTGCTGGACGCGCCCTGCAGCGCCTCGGGCATCGTCAGCCGCCATCCCGACGTGCGCTGGCTGCGGCGCGAATCCGACCTGGCCCAGCTCGCCGCCCGCCAGGACCGGCTGCTGCAGGCCCTGTGGCCGCTGCTGCGCCCCGGTGGGCAACTGCTGTACTGCACCTGCTCGGTGTTCGCCCAGGAGGGGCGCGAACGCATCGAGTCGTTTCTTGCGCGCCACAGTGATGCCCTGCCATGCCCTTCGCCCGGCCATATATTGCCCTCCGCGGCGGGGTTGGCACCCGGGCTTGGCGACAATGCGGTCTGTGAAGACGGGTTTTATTACGCGCTGCTGCGCAAACGCCTGGATTAG
PROTEIN sequence
Length: 443
MAASPGQALPLWRQLQATARLVAAVEAGRSLSAELAQVDAPLRPGAQALSFHALRWLGLARALRARLARRAPPPAVDALLCTSLALAQPADGAPYEAFTLVDQAVEAAKRDRVLRPHAAFINACLRRFLRERAALTAAVLHDPAARWNHPRWWVERLRRDHPEHWQAILSAAQHAAPMDLRVNPRRASVADVCARLAQQGAGVRALGGAALRLERPRAVQDLPGFAAGELSVQSATAQRAAPLLLEGCADVAAPRVLDACAAPGGKTAHLLELRADARVTALEIDPARSARIGETLARLGLHADVRVADAADVPSWWQGERYDAILLDAPCSASGIVSRHPDVRWLRRESDLAQLAARQDRLLQALWPLLRPGGQLLYCTCSVFAQEGRERIESFLARHSDALPCPSPGHILPSAAGLAPGLGDNAVCEDGFYYALLRKRLD*